Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq1 96.9 3e-15
>seq1
Length=4666273
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| |||||||| || || || || || || ||||| || || ||| | |||
Sbjct 4323619 AGACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGA 4323560
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | ||||||||| || || || || ||||| || |||| ||| | ||||||
Sbjct 4323559 CCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCC 4323500
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || || | | || || || | ||||||||||| |||
Sbjct 4323499 TTGTCTTGGATCTTGCTCTTGACGTTGTCGATAGTATCAGAGGACTCCACCTCCAGGGTA 4323440
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || ||||| || | || || || || ||||||||
Sbjct 4323439 ATAGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 4323402
Score = 82.4 bits (90), Expect = 6e-11
Identities = 93/125 (74%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
|||| || || ||| ||| || || || |||||||| || ||| | ||| | || |||
Sbjct 4323965 ACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCCTCC 4323906
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
|||||||| || || || ||||| ||||| || |||| || | ||||||||||| |
Sbjct 4323905 AACTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGA 4323846
Query 48678 ATCTT 48682
|||||
Sbjct 4323845 ATCTT 4323841
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380936541469644
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |