Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq12 297 4e-75 seq2 118 2e-21 >seq12 Length=996256 Score = 297 bits (328), Expect = 4e-75 Identities = 959/1466 (65%), Gaps = 61/1466 (4%) Strand=Plus/Minus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGA 221476 ||||| ||| |||||||||||||||| |||||| |||| || |||||||||||| Sbjct 677493 GTCAGAGCACCGTGGTAGATGGTCTCGAAGATCTGAATGTTCAGCTGCTTGGCCTCGGGG 677434 Query 221477 GAAGTGAAGGGCATACGCA--GCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATAC 221534 || ||| |||| ||||| ||| ||||| | || |||| || | || || | | Sbjct 677433 GAGTCGAAAGGCAGACGCAAAGCAAG-GAAAG-CATCAGCCAAACCGTTGACACCCAGAG 677376 Query 221535 CGATGGGCCTGTGTCTCCTGTTGGAAGCGGCC--GCTTCTGGCACGGGATAAAAGTTGAC 221592 ||||||| | ||| | ||| | | | || || || || || || |||||| Sbjct 677375 CGATGGGACGGTGGCGGAAGTT--ACTCTTCTTGGCCTCGGGAACAGGGTAGTAGTTGAT 677318 Query 221593 GTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTG 221652 |||||| | ||||| ||||| | | || | || |||||| |||||| | Sbjct 677317 GTCGATGATCTTGTTCAGGTTACGGACCAGAACCTGGACGACCTCGTGCAGCTTGCCG-- 677260 Query 221653 ATTGAACACCAACTCGCCGCCGTCGTGGAGGGGT-TCCACAAAAGCGTTTAGGGCAACGC 221711 || | ||||||| | ||| || || || |||| | || || | | Sbjct 677259 ----AAGTCGTACTCGCCAC-------GAGCGGCATCAACGAAAGTGGGCAGAGCCAGGG 677211 Query 221712 TGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGA 221771 ||||| ||| || || || ||||| || | | |||| |||||||| || || | Sbjct 677210 AGGCCAAGTTGCAAACAGCGACCTCATCAGGGGCACTGTACTCAATGATCTCAGTGCAAA 677151 Query 221772 GGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCT 221831 ||||| || ||||| ||||||| || || || |||||| ||| ||| |||| Sbjct 677150 GGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCT 677091 Query 221832 TGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTT 221891 |||| ||||| ||||| |||||||| ||||||| | || || | ||| || | Sbjct 677090 TGTAAAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATGGCATACCACAGCT 677031 Query 221892 CTCTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATAC--CCGGTATAGA 221948 |||| || | | ||| | | | ||||| ||| || ||| | ||| ||| Sbjct 677030 -TCTGAGCCTTGAAGGTCTTACGGCCACGGCCCTC---CTTCTCGTACTTCTCGTACAGA 676975 Query 221949 GCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCA 222008 |||| |||||| || ||||| | ||| | || || || | | ||| || | || Sbjct 676974 GCAT--CAAACTCCTCGCCGTAGACGTCGGCAAGACCAGGGGCCTCGTTGGGGCAGAACA 676917 Query 222009 GACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCT 222068 || |||||| |||| | | || | || |||||| || || ||| ||||||| || Sbjct 676916 GAGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAACAGATCAGGGGTCCACAGAGCGA 676857 Query 222069 GAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACT 222128 |||||||| | | || ||||||| |||| ||| || | ||| ||||| |||| Sbjct 676856 AGAAGAGATCACGAGCACGAACCTCCTCCTTACCGTGGTTCTTGCGCAGGTCCAAGAACT 676797 Query 222129 CAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGC 222188 | || | ||| |||||||| ||||| || |||| ||| | || ||||| |||||||||| Sbjct 676796 CGAACACGTCGGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGC 676737 Query 222189 CACCCTGATCCACCATCCTCTCCAGAGC-GTTGAAGATGCGAAGGGTCGGTACCAGTCCG 222247 ||||||| || || || | | | |||||| | || || | || || | ||| Sbjct 676736 CACCCTGGTCGAC-ATAGCGAGCGGTGTTGTTGAACACACGCAGCATAGGAACGATACCG 676678 Query 222248 TTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC--TGGCAG 222305 ||||| ||||||||| || |||||| | || || | || | | ||| | Sbjct 676677 TTGGAGGAACCGTTGGTACCGCCAATGTAGGAGCCAGTAGCAC---GGATGCGGTGGACG 676621 Query 222306 A-CATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATG 222364 || ||| |||||||| ||| || || |||||||| ||| |||| |||||||| | Sbjct 676620 TTCAAGCCAATACCACCAGCGGTCTTGGAAATCATGGCACAGGTCTTCAGAGTGTCATAG 676561 Query 222365 ATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTG 222424 || ||||| || ||||||||| | | | ||| || ||||| | || || | Sbjct 676560 ATACCCTCAATGCTGTCCTCCTTCATATCAACCAGGAAGCAAGAAGCCAATTGGGGAGAA 676501 Query 222425 GTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGA 222484 | | || |||||| ||||| ||||| ||||| || ||| | | ||||||| Sbjct 676500 GGAGTACCGGCGTTGAACAGTGTGGGGGAAGCGTGGGTGAAGAACTTCTGGGACATCAAG 676441 Query 222485 TCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAAT-----CTGCATGGCGCATC 222539 | ||| ||||| | | | | |||| | || ||||| || ||||| |||||| Sbjct 676440 TGGTAGGTCTCAATGGCCTTTTCGATATCCTCACCGTGGATACCAACTGCAACACGCATC 676381 Query 222540 TCATGTACATGTACTGGGGCCTCTCCACAGGACCCTT---GGAGCTGGAGAGCAGGTACG 222596 ||| || |||||| | ||| || | |||| | | || ||||||||| | Sbjct 676380 A-----ACAGGTGCTGGGGACGCTC---AGCAACCTTACCGTTGATGCGGAGCAGGTATG 676329 Query 222597 ATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGG 222656 | || || |||||||| |||||| ||||| || |||||| | | ||| ||| | || Sbjct 676328 AACGCTCGAGGGTCTTGAAACCAAAGAAGTTGTAGTTAAAGTCACGGTCGTAAACGATGG 676269 Query 222657 CGGCGTCCAGCTC--CGACTTGTGCTTTACGCTCAACTCGAAAAAGCGCTCAGACACGAG 222714 | | || ||||| || | ||||||| | | |||| | | | | | ||| | | Sbjct 676268 CCGAGTTGAGCTCATCGGC--GTGCTTTGTAATAATCTCGTAGATGTGTTGAGAGATCAT 676211 Query 222715 GGGAGCGTTCTCTTTGGTGTCGGGGTTAACGTTGTGGTACAGCTGCCACATGGCATCAGA 222774 ||||||| || ||| | | |||||| || | |||||| || | | ||| | || Sbjct 676210 GGGAGCGGGCTTGTTGTTTTTGGGGTTGACATAGTGGTAAAGGTCTGAGATGACCATGGA 676151 Query 222775 GAAC-GTGTCGGGAGTCTGCTTGTGCAGATTCGACACGGCGATCCGAGACGCCAAGATAC 222833 ||| | || | ||||||||||| || || || |||||||| |||| |||| ||| Sbjct 676150 GAATTGCTTCTTG-GTCTGCTTGTGGAGGTTGGAAACGGCGATACGAGCGGCCAGGATGG 676092 Query 222834 CATAGTCAGGGTGCACGGTGGTCATG 222859 | ||||||||||| | ||||||| Sbjct 676091 CGTAGTCAGGGTGTGTGACGGTCATG 676066 >seq2 Length=2385438 Score = 118 bits (130), Expect = 2e-21 Identities = 298/455 (65%), Gaps = 23/455 (5%) Strand=Plus/Plus Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936 |||| ||||| |||||||| || || ||||| ||||| ||| || || ||||| | | Sbjct 270318 AGCGTCTGGTTGCCTTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGCTCCTTTGCCTCTA 270377 Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATC 25995 |||||||||| ||| || || ||||| || ||| ||||| ||||||||||| ||| Sbjct 270378 TCTTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGTCTG-ACTTTCTCCAACGAGCTTATC 270436 Query 25996 AGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTC 26055 | || ||||||||||||| || || ||||| ||||| | | | |||| ||| Sbjct 270437 TCTCGTGATGAGGGTCTCCACACCGACTTCGCCTGTCTGCTTTTCTC---CCAC---CTC 270490 Query 26056 CACAA---ACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAG 26112 |||| || || | || || | ||||| |||||||| | |||||| Sbjct 270491 AACAACCGCCCCTCCCCCAAGGTTGTTGAGGACATCATTGTCGAGGCTGTCGGCATCGAG 270550 Query 26113 AAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATG 26172 ||||||| | | ||||||||| || |||||| Sbjct 270551 CAGGAGTTCCTGACTGATGCCCTTCCCTGTGCTCTGCTTGGCATGAACGCCAAGCTCATG 270610 Query 26173 AGCCAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCG----CCAG 26228 |||||||||| |||| || || |||| ||| ||| | ||| |||| |||| Sbjct 270611 TGCCAATACATCGAGTTCGTCGCTGACCGTCTCCTGGTC--GCT----CTCGGCAACCAG 270664 Query 26229 A--CTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAG 26286 | || || | | | ||||| |||||||| ||||| || || ||| || ||| Sbjct 270665 AAGTACTTCAATGCCACCAACCCCTTCGACTTCATGGAGTCTATCTCTCTGGCTGGCAAG 270724 Query 26287 ACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321 ||||||||||| || ||| | ||||| ||||| || Sbjct 270725 ACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCA 270759 Score = 95.1 bits (104), Expect = 2e-14 Identities = 161/233 (69%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | ||| |||||| || || |||||||||||| Sbjct 269852 ATCTGGCACATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCAGAGGAGATTGATCTG 269911 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATT---TTCTCAAG 25593 ||||||| | ||| |||| || | || ||||| ||| || || || Sbjct 269912 TCCAAGGATCTCCACGACTGGCACAACCGCATGAACGACGATGAGCGTTACTTTGTCTCC 269971 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | || ||||| || ||||| |||||||| || |||||||| || ||| | Sbjct 269972 CACGTCCTTGCTTTCTTCGCCGCCTCCGATGGTATTGTCAACGAGAACTTGCTTGAGCGT 270031 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 |||| | || || ||| | |||||| || ||||||||||||||||| Sbjct 270032 TTCAGTGGAGAGGTTCAGGTCCCCGAGGCCCGCTGCTTCTACGGTTTCCAGAT 270084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928842152792320