Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq12 239 5e-58 seq2 111 2e-19 >seq12 Length=996256 Score = 239 bits (264), Expect = 5e-58 Identities = 566/848 (67%), Gaps = 9/848 (1%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| || |||| ||||| || ||| | || |||||||| || || || || | | Sbjct 676367 CCCCAGCACCTGTTGATGCGTGTTGCAGTTGGTATCCACGGTGAGGATATCGAAAAGGCC 676426 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| ||| || ||||||||| | || | |||| ||||| | || || || || Sbjct 676427 ATTGAGACCTACCACTTGATGTCCCAGAAGT-TCTTCACCCACGCTTCCCCCACACTGTT 676485 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| || ||||| || || || || | ||||||||| | | | |||||||| Sbjct 676486 CAACGCCGGTACTCCTTCTCCCCAATTGGCTTCTTGCTTCCTGGTTGATATGAAGGAGGA 676545 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | || | |||||||||| ||||| | | ||||| || || ||| ||||| Sbjct 676546 CAGCATTGAGGGTATCTATGACACTCTGAAGACCTGTGCCATGATTTCCAAGACCGCTGG 676605 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 |||||||| || || |||| | | || | | || ||| | || || || Sbjct 676606 TGGTATTGGCTTGAACGTCCACCGCATCCGTGCTACTGGCTCCTACATTGGCGGTACCAA 676665 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 ||| || | ||||| |||| ||||| || || || ||| ||| || |||||||| Sbjct 676666 CGGTTCCTCCAACGGTATCGTTCCTATGCTGCGTGTGTTCAACAACACCGCTCGCTATGT 676725 Query 75571 AAATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATG 75626 | || | | ||| | || || || | || ||||| | || || ||||| | Sbjct 676726 CGACCAGG-GTGGCAACAAGCGCCCCGGTGCCTTTGCCATCTACCTTGAGCCCTGGCACG 676784 Query 75627 CCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTA 75686 |||| | | |||||| | || | || ||||| ||| | || |||| ||| | Sbjct 676785 CCGACGTGTTCGAGTTCTTGGACCTGCGCAAGAACCACGGTAAGGAGGAGGTTCGTGCTC 676844 Query 75687 GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTG 75746 | |||||||| | | ||||||| || || || ||||||||||| ||||||| | Sbjct 676845 GTGATCTCTTCTTCGCTCTGTGGACCCCTGATCTGTTCATGAAGCGTGTTGAGGCCAACG 676904 Query 75747 GTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGG 75806 || | ||| |||| ||||| || || |||| || ||||| |||||| || |||| Sbjct 676905 GTGACTGGACTCTGTTCTGCCCCAACGAGGCCCCTGGTCTTGCCGACGTCTACGGCGAGG 676964 Query 75807 AGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAG 75866 ||||||| || || ||| ||||| || ||||||| | | | | ||| | | || Sbjct 676965 AGTTTGATGCTCTGTACGAGAAGTACGAGAAGGAGGGCCGTGGCCGTAAGAC-CTTCAAG 677023 Query 75867 CCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATG 75925 | | || | | ||| | || || ||| | | ||||| |||||||| | || | ||| Sbjct 677024 GCTCAGAAGCTGTGGTATGCCATCCTCGAGGCTCAGACTGAGACTGGTAACCCCTTCATG 677083 Query 75926 CTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGC 75985 ||||||||||||||||| ||| ||||| ||||| ||||| |||| || || ||| Sbjct 677084 CTTTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTGGGTACCATTCGCAGC 677143 Query 75986 TCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAAT 76045 || || |||||||| || || | ||||||| | |||||| ||||||||||| Sbjct 677144 TCCAACCTTTGCACTGAGATCATTGAGTACAGTGCCCCTGATGAGGTCGCTGTTTGCAAC 677203 Query 76046 TTGGCATC 76053 ||||| || Sbjct 677204 TTGGCCTC 677211 >seq2 Length=2385438 Score = 111 bits (122), Expect = 2e-19 Identities = 114/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128 |||||||| |||| || |||| ||||| || ||||||||||||||||| || || | Sbjct 270309 CCTTCGCCCAGCGTCTGGTTGCCTTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGCTCCT 270368 Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188 | | |||| | ||| |||||||||| ||||| ||||| || || ||||| || | Sbjct 270369 TTGCCTCTATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGTCTGACTTTCTCCAACG 270428 Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCAC 65217 | ||||| || || ||||||||||||||| Sbjct 270429 AGCTTATCTCTCGTGATGAGGGTCTCCAC 270457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596567899776640