Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1 114 4e-20 seq12 111 5e-19 seq2 100 8e-16 seq17 86.0 2e-11 seq5 84.2 6e-11 >seq1 Length=4666273 Score = 114 bits (126), Expect = 4e-20 Identities = 177/250 (71%), Gaps = 2/250 (1%) Strand=Plus/Minus Query 302595 ACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACC 302654 ||||||||| ||||| ||| | || || || || |||||||| ||||| ||||||| Sbjct 104199 ACGCTGAATGTAACCGGTTTCGGCAGTCTTGACGGCAGTATCAATCAGACCTTCACGACC 104140 Query 302655 ACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAA 302713 | |||| || |||||||| | ||| || ||| || || | || | | || |||| | Sbjct 104139 AGCCATGGCGTGGAAGAAGAACTCCGTAGG-CGTCAGACCACGAAGATAAGAATTCTCGA 104081 Query 302714 CGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCT 302773 |||||||||| | |||||| |||| ||| ||| || || ||||||| ||| | || | Sbjct 104080 CGAAACCACGAGACTCGGGAGAATAGTCATCCTTAGTGAAATGTGGCAAGGTACGGTATT 104021 Query 302774 CATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCT 302833 | || | || |||||||| || || || ||||||||| | | | |||||| Sbjct 104020 TGAAACCAAAGGGAATACGCTTGCCTTCCACTGACTGCTGTCCAACGACGGCTGTCATCT 103961 Query 302834 GCGAAATATT 302843 | || ||||| Sbjct 103960 GGGAGATATT 103951 Score = 104 bits (114), Expect = 7e-17 Identities = 108/141 (77%), Gaps = 3/141 (2%) Strand=Plus/Minus Query 301812 CAGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGC 301871 ||||||||| | | ||| |||||||| | || ||||| |||||| | ||||||||| Sbjct 104997 CAGAATTTCCTTGAGACGAGGAACACCCAGAGTGACGTT---CTTGGATGAAACACCAGC 104941 Query 301872 AAAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAAT 301931 ||||||||| || || ||||| | ||||||| |||||||| ||| || || |||| Sbjct 104940 AAAGTGGAAGGTGTTGAGAGTCATCTGAGTAGCAGGCTCACCGATAGACTGAGCTGCAAG 104881 Query 301932 CATACCAACCATTTCTCCTGG 301952 | |||||||||||| || || Sbjct 104880 GACACCAACCATTTCACCAGG 104860 Score = 93.3 bits (102), Expect = 1e-13 Identities = 109/147 (74%), Gaps = 8/147 (5%) Strand=Plus/Plus Query 233276 CCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCA----TT 233331 |||| ||| |||| ||||||||| ||||||||||| | ||| |||||||||||| Sbjct 1329528 CCGTAAGCGATCAGACAATCACGCTCCATTTCACCGAGACGGAGACCACCATCACGAGAA 1329587 Query 233332 TGACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAATT 233391 ||||| || ||| |||| ||||| || || | ||||| ||||||| ||| Sbjct 1329588 CGACCTTCCGTGGGCTGT----CGAGTCAACGTAGCCTTGGGACCACGAGCACGCGAATG 1329643 Query 233392 AATTTTATCTTTAACCATATGCTTCAG 233418 || ||||||| |||||| |||||||| Sbjct 1329644 CATCTTATCTTGAACCATGTGCTTCAG 1329670 Score = 91.5 bits (100), Expect = 4e-13 Identities = 135/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 251497 ATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCCCTACCCTCG 251556 |||| ||||||||||||||||||||||| ||| ||||||||||| |||| | ||| || Sbjct 1329537 ATCAGACAATCACGCTCCATTTCACCGAGACGGAGACCACCATCACGAGAACGACCTTCC 1329596 Query 251557 GCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGTTGCTTATCATTT 251616 | ||||| ||||| | || || | ||||| | || ||| |||||| | Sbjct 1329597 GTGGGCTGTCGAGTCAACGTAGCCTTGGGACCACGAGCACGCGAATGCATCTTATCTTGA 1329656 Query 251617 ACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATGCTCGAA-GGCATTTG 251675 ||||| ||||| || ||||||| | ||||| |||||| | ||| |||| | Sbjct 1329657 ACCATGTGCTTCAGCTTCTGGTAGTAGATAGGACCCGTGAAGA-CATAGAAGGGCAGAGG 1329715 Query 251676 CTCTCCAGT 251684 ||||||||| Sbjct 1329716 CTCTCCAGT 1329724 >seq12 Length=996256 Score = 111 bits (122), Expect = 5e-19 Identities = 565/900 (63%), Gaps = 3/900 (0%) Strand=Plus/Minus Query 155628 CTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGG 155687 ||||| || | |||||| ||| ||||| || || ||||| || | ||||||||| Sbjct 677175 CTGTACTCAATGATCTCAGTGCAAAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGG 677116 Query 155688 TTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGT 155747 || || | ||| |||||||||||||| || ||| | ||| | || ||||| |||| Sbjct 677115 TTGCTCTTGCGGTTGCAAGCATCCTTGTAAAGCATGAAGGGGTTACCAGTCTCAGTCTGA 677056 Query 155748 GCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCC 155807 || || || || ||| || | | || || | ||| | | ||| ||| Sbjct 677055 GCCTCGAGGATGGCATACCACAGCTTCTGAGCCTTGAAGGTCTTACGGCCACGGCCCTCC 676996 Query 155808 GACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGG 155867 ||| || ||| ||||| | | ||||| ||||| || || |||||| Sbjct 676995 TTCTCGTACTTCTCGTACAGAGCATCAAACTCCTCGCCGTAGACGTCGGCAAGACCAGGG 676936 Query 155868 CACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACA 155927 || | |||||| ||||| | ||| || | ||||||| ||| || | | Sbjct 676935 GCCTCGTTGGGGCAGAACAGAGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAACAGA 676876 Query 155928 TCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTC 155987 ||| | ||| | ||| |||| || || | || |||||| | ||||| ||| Sbjct 676875 TCAGGGGTCCACAGAGCGAAGAAGAGATCACGAGCACGAACCTCCTCCTTACCGTGGTTC 676816 Query 155988 TTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAA 156047 || || || || ||||| || | || | || ||||| || || || ||||| Sbjct 676815 TTGCGCAGGTCCAAGAACTCGAACACGTCGGCGTGCCAGGGCTCAAGGTAGATGGCAAAG 676756 Query 156048 CTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCT 156104 ||| | |||| |||||||| || ||||| ||||| || || ||||| |||| Sbjct 676755 GCACCGGGGCGCTTGTTGCCACCCTGGTCGACATAGCGAGCGGTGTTGTTGAACACACGC 676696 Query 156105 AGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAG 156164 |||||||||| ||||| ||||| | || ||||| |||| ||| | || |||| | Sbjct 676695 AGCATAGGAACGATACCGTTGGAGGAACCGTTGGTACCGCCAATGTAGGAGCCAGTAGCA 676636 Query 156165 CGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCC 156224 || | || | | | ||||||||||| | || ||||| || || | Sbjct 676635 CGGATGCGGTGGACGTTCAAGCCAATACCACCAGCGGTCTTGGAAATCATGGCACAGGTC 676576 Query 156225 TTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAA 156284 || | ||| | | ||||| ||||| || || | ||| | || |||| ||| Sbjct 676575 TTCAGAGTGTCATAGATACCCTCAATGCTGTCCTCCTTCATATCAACCAGGAAGCAAGAA 676516 Query 156285 CTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATAC 156344 ||||| || || || || |||||||| ||||| || | || || | || || Sbjct 676515 GCCAATTGGGGAGAAGGAGTACCGGCGTTGAACAGTGTGGGGGAAGCGTGGGTGAAGAAC 676456 Query 156345 TTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAG 156404 || | ||||| | | ||| ||||| | ||| || | || ||||| |||| Sbjct 676455 TTCTGGGACATCAAGTGGTAGGTCTCAATGGCCTTTTCGATATCCTCACCGTGGATACCA 676396 Query 156405 ATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGA 156464 | | || | |||| ||| ||||| |||||||| ||| | || | || || || Sbjct 676395 ACTGCAACACGCATCAACAGGTGCTGGGGACGCTCAGCAACCTTACCGTTGATGCGGAGC 676336 Query 156465 AGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGTTGTAA 156524 ||||||| || || || || || || || || | | | ||| ||||||| |||| Sbjct 676335 AGGTATGAACGCTCGAGGGTCTTGAAACCAAAGAAGTTGTAGTTAAAGTCACGGTCGTAA 676276 >seq2 Length=2385438 Score = 100 bits (110), Expect = 8e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 133458 CTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTG 133517 |||||||||| || ||||||||||||||| | | || || ||||| |||| Sbjct 270270 CTGACTGGGCCATCCGCTGGATCCAGGACAAGGAGTCCACCTTCGCCCAGCGTCTGGTTG 270329 Query 133518 CTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTA 133577 | ||||| | || ||||| || || ||| ||| | || |||||| || ||||| | Sbjct 270330 CCTTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGCTCCTTTGCCTCTATCTTCTGGCTGA 270389 Query 133578 AAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGG 133637 | ||||||||| | | ||||| ||| ||| || ||||| ||||| || | || |||| Sbjct 270390 AGAAGCGTGGTCTGATGCCTGGTCTGACTTTCTCCAACGAGCTTATCTCTCGTGATGAGG 270449 Query 133638 CACTTCACACCGAATTTGCC 133657 || |||||||| || ||| Sbjct 270450 GTCTCCACACCGACTTCGCC 270469 >seq17 Length=689773 Score = 86.0 bits (94), Expect = 2e-11 Identities = 129/179 (72%), Gaps = 12/179 (7%) Strand=Plus/Minus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 |||||||| | |||||| |||||||||||||| || |||||||| ||||||||||| || Sbjct 345530 GCACCGTGAGCAATCATGCAATCACGCTCCATCTCTCCGAAACGGAGACCACCATCACGG 345471 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGT-GAGAT-TAACCATAGGACC----GATGGAGCGG 251598 || | ||| || | || ||||| || |||| | | | ||||| | ||||| Sbjct 345470 GCACGACCTTCCACGGGTTGACGGGTCAAGATCTGA--GTTGGACCACGAGCACGAGCG- 345414 Query 251599 CTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAA 251657 || ||| || | |||||| || |||||||||||| ||| |||||| | ||| Sbjct 345413 ---TGGATCTTGTCGTCTACCATGTGACGAAGACGCTGGTAGTATGTGGGACCCAGGAA 345358 >seq5 Length=1529696 Score = 84.2 bits (92), Expect = 6e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 354015 GGCGAGAGCACCAAGCGAGTCACGGTCGAGGAAATTAGTAGGTTCGTCAAGGATAAGAAC 354074 ||| ||| |||| | ||||||||||| | ||| |||||||| ||||| || | || | Sbjct 520645 GGCAAGACCACCCAAAGAGTCACGGTCCAAGAAGTTAGTAGGCTCGTCCAGAACCAGCAA 520586 Query 354075 GTGCGGCTCCATCCACATTGCTGCAGCCAGAACTACCTTAACCTTCTGTCCGCCTGATAG 354134 ||| || | ||||||| || | ||||| || ||||| |||||||| ||||| || || Sbjct 520585 GTGGGGGTTGTTCCACATGGCACCGGCCAGCACGACCTTGACCTTCTGACCGCCGGACAG 520526 Query 354135 TGCGTGAATCT 354145 || ||||| Sbjct 520525 ACCGGAAATCT 520515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471813300452836