Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq1 114 4e-20
seq12 111 5e-19
seq2 100 8e-16
seq17 86.0 2e-11
seq5 84.2 6e-11
>seq1
Length=4666273
Score = 114 bits (126), Expect = 4e-20
Identities = 177/250 (71%), Gaps = 2/250 (1%)
Strand=Plus/Minus
Query 302595 ACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACC 302654
||||||||| ||||| ||| | || || || || |||||||| ||||| |||||||
Sbjct 104199 ACGCTGAATGTAACCGGTTTCGGCAGTCTTGACGGCAGTATCAATCAGACCTTCACGACC 104140
Query 302655 ACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAA 302713
| |||| || |||||||| | ||| || ||| || || | || | | || |||| |
Sbjct 104139 AGCCATGGCGTGGAAGAAGAACTCCGTAGG-CGTCAGACCACGAAGATAAGAATTCTCGA 104081
Query 302714 CGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCT 302773
|||||||||| | |||||| |||| ||| ||| || || ||||||| ||| | || |
Sbjct 104080 CGAAACCACGAGACTCGGGAGAATAGTCATCCTTAGTGAAATGTGGCAAGGTACGGTATT 104021
Query 302774 CATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCT 302833
| || | || |||||||| || || || ||||||||| | | | ||||||
Sbjct 104020 TGAAACCAAAGGGAATACGCTTGCCTTCCACTGACTGCTGTCCAACGACGGCTGTCATCT 103961
Query 302834 GCGAAATATT 302843
| || |||||
Sbjct 103960 GGGAGATATT 103951
Score = 104 bits (114), Expect = 7e-17
Identities = 108/141 (77%), Gaps = 3/141 (2%)
Strand=Plus/Minus
Query 301812 CAGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGC 301871
||||||||| | | ||| |||||||| | || ||||| |||||| | |||||||||
Sbjct 104997 CAGAATTTCCTTGAGACGAGGAACACCCAGAGTGACGTT---CTTGGATGAAACACCAGC 104941
Query 301872 AAAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAAT 301931
||||||||| || || ||||| | ||||||| |||||||| ||| || || ||||
Sbjct 104940 AAAGTGGAAGGTGTTGAGAGTCATCTGAGTAGCAGGCTCACCGATAGACTGAGCTGCAAG 104881
Query 301932 CATACCAACCATTTCTCCTGG 301952
| |||||||||||| || ||
Sbjct 104880 GACACCAACCATTTCACCAGG 104860
Score = 93.3 bits (102), Expect = 1e-13
Identities = 109/147 (74%), Gaps = 8/147 (5%)
Strand=Plus/Plus
Query 233276 CCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCA----TT 233331
|||| ||| |||| ||||||||| ||||||||||| | ||| ||||||||||||
Sbjct 1329528 CCGTAAGCGATCAGACAATCACGCTCCATTTCACCGAGACGGAGACCACCATCACGAGAA 1329587
Query 233332 TGACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAATT 233391
||||| || ||| |||| ||||| || || | ||||| ||||||| |||
Sbjct 1329588 CGACCTTCCGTGGGCTGT----CGAGTCAACGTAGCCTTGGGACCACGAGCACGCGAATG 1329643
Query 233392 AATTTTATCTTTAACCATATGCTTCAG 233418
|| ||||||| |||||| ||||||||
Sbjct 1329644 CATCTTATCTTGAACCATGTGCTTCAG 1329670
Score = 91.5 bits (100), Expect = 4e-13
Identities = 135/189 (71%), Gaps = 2/189 (1%)
Strand=Plus/Plus
Query 251497 ATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCCCTACCCTCG 251556
|||| ||||||||||||||||||||||| ||| ||||||||||| |||| | ||| ||
Sbjct 1329537 ATCAGACAATCACGCTCCATTTCACCGAGACGGAGACCACCATCACGAGAACGACCTTCC 1329596
Query 251557 GCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGTTGCTTATCATTT 251616
| ||||| ||||| | || || | ||||| | || ||| |||||| |
Sbjct 1329597 GTGGGCTGTCGAGTCAACGTAGCCTTGGGACCACGAGCACGCGAATGCATCTTATCTTGA 1329656
Query 251617 ACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATGCTCGAA-GGCATTTG 251675
||||| ||||| || ||||||| | ||||| |||||| | ||| |||| |
Sbjct 1329657 ACCATGTGCTTCAGCTTCTGGTAGTAGATAGGACCCGTGAAGA-CATAGAAGGGCAGAGG 1329715
Query 251676 CTCTCCAGT 251684
|||||||||
Sbjct 1329716 CTCTCCAGT 1329724
>seq12
Length=996256
Score = 111 bits (122), Expect = 5e-19
Identities = 565/900 (63%), Gaps = 3/900 (0%)
Strand=Plus/Minus
Query 155628 CTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGG 155687
||||| || | |||||| ||| ||||| || || ||||| || | |||||||||
Sbjct 677175 CTGTACTCAATGATCTCAGTGCAAAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGG 677116
Query 155688 TTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGT 155747
|| || | ||| |||||||||||||| || ||| | ||| | || ||||| ||||
Sbjct 677115 TTGCTCTTGCGGTTGCAAGCATCCTTGTAAAGCATGAAGGGGTTACCAGTCTCAGTCTGA 677056
Query 155748 GCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCC 155807
|| || || || ||| || | | || || | ||| | | ||| |||
Sbjct 677055 GCCTCGAGGATGGCATACCACAGCTTCTGAGCCTTGAAGGTCTTACGGCCACGGCCCTCC 676996
Query 155808 GACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGG 155867
||| || ||| ||||| | | ||||| ||||| || || ||||||
Sbjct 676995 TTCTCGTACTTCTCGTACAGAGCATCAAACTCCTCGCCGTAGACGTCGGCAAGACCAGGG 676936
Query 155868 CACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACA 155927
|| | |||||| ||||| | ||| || | ||||||| ||| || | |
Sbjct 676935 GCCTCGTTGGGGCAGAACAGAGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAACAGA 676876
Query 155928 TCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTC 155987
||| | ||| | ||| |||| || || | || |||||| | ||||| |||
Sbjct 676875 TCAGGGGTCCACAGAGCGAAGAAGAGATCACGAGCACGAACCTCCTCCTTACCGTGGTTC 676816
Query 155988 TTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAA 156047
|| || || || ||||| || | || | || ||||| || || || |||||
Sbjct 676815 TTGCGCAGGTCCAAGAACTCGAACACGTCGGCGTGCCAGGGCTCAAGGTAGATGGCAAAG 676756
Query 156048 CTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCT 156104
||| | |||| |||||||| || ||||| ||||| || || ||||| ||||
Sbjct 676755 GCACCGGGGCGCTTGTTGCCACCCTGGTCGACATAGCGAGCGGTGTTGTTGAACACACGC 676696
Query 156105 AGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAG 156164
|||||||||| ||||| ||||| | || ||||| |||| ||| | || |||| |
Sbjct 676695 AGCATAGGAACGATACCGTTGGAGGAACCGTTGGTACCGCCAATGTAGGAGCCAGTAGCA 676636
Query 156165 CGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCC 156224
|| | || | | | ||||||||||| | || ||||| || || |
Sbjct 676635 CGGATGCGGTGGACGTTCAAGCCAATACCACCAGCGGTCTTGGAAATCATGGCACAGGTC 676576
Query 156225 TTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAA 156284
|| | ||| | | ||||| ||||| || || | ||| | || |||| |||
Sbjct 676575 TTCAGAGTGTCATAGATACCCTCAATGCTGTCCTCCTTCATATCAACCAGGAAGCAAGAA 676516
Query 156285 CTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATAC 156344
||||| || || || || |||||||| ||||| || | || || | || ||
Sbjct 676515 GCCAATTGGGGAGAAGGAGTACCGGCGTTGAACAGTGTGGGGGAAGCGTGGGTGAAGAAC 676456
Query 156345 TTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAG 156404
|| | ||||| | | ||| ||||| | ||| || | || ||||| ||||
Sbjct 676455 TTCTGGGACATCAAGTGGTAGGTCTCAATGGCCTTTTCGATATCCTCACCGTGGATACCA 676396
Query 156405 ATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGA 156464
| | || | |||| ||| ||||| |||||||| ||| | || | || || ||
Sbjct 676395 ACTGCAACACGCATCAACAGGTGCTGGGGACGCTCAGCAACCTTACCGTTGATGCGGAGC 676336
Query 156465 AGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGTTGTAA 156524
||||||| || || || || || || || || | | | ||| ||||||| ||||
Sbjct 676335 AGGTATGAACGCTCGAGGGTCTTGAAACCAAAGAAGTTGTAGTTAAAGTCACGGTCGTAA 676276
>seq2
Length=2385438
Score = 100 bits (110), Expect = 8e-16
Identities = 142/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 133458 CTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTG 133517
|||||||||| || ||||||||||||||| | | || || ||||| ||||
Sbjct 270270 CTGACTGGGCCATCCGCTGGATCCAGGACAAGGAGTCCACCTTCGCCCAGCGTCTGGTTG 270329
Query 133518 CTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTA 133577
| ||||| | || ||||| || || ||| ||| | || |||||| || ||||| |
Sbjct 270330 CCTTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGCTCCTTTGCCTCTATCTTCTGGCTGA 270389
Query 133578 AAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGG 133637
| ||||||||| | | ||||| ||| ||| || ||||| ||||| || | || ||||
Sbjct 270390 AGAAGCGTGGTCTGATGCCTGGTCTGACTTTCTCCAACGAGCTTATCTCTCGTGATGAGG 270449
Query 133638 CACTTCACACCGAATTTGCC 133657
|| |||||||| || |||
Sbjct 270450 GTCTCCACACCGACTTCGCC 270469
>seq17
Length=689773
Score = 86.0 bits (94), Expect = 2e-11
Identities = 129/179 (72%), Gaps = 12/179 (7%)
Strand=Plus/Minus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
|||||||| | |||||| |||||||||||||| || |||||||| ||||||||||| ||
Sbjct 345530 GCACCGTGAGCAATCATGCAATCACGCTCCATCTCTCCGAAACGGAGACCACCATCACGG 345471
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGT-GAGAT-TAACCATAGGACC----GATGGAGCGG 251598
|| | ||| || | || ||||| || |||| | | | ||||| | |||||
Sbjct 345470 GCACGACCTTCCACGGGTTGACGGGTCAAGATCTGA--GTTGGACCACGAGCACGAGCG- 345414
Query 251599 CTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAA 251657
|| ||| || | |||||| || |||||||||||| ||| |||||| | |||
Sbjct 345413 ---TGGATCTTGTCGTCTACCATGTGACGAAGACGCTGGTAGTATGTGGGACCCAGGAA 345358
>seq5
Length=1529696
Score = 84.2 bits (92), Expect = 6e-11
Identities = 97/131 (74%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 354015 GGCGAGAGCACCAAGCGAGTCACGGTCGAGGAAATTAGTAGGTTCGTCAAGGATAAGAAC 354074
||| ||| |||| | ||||||||||| | ||| |||||||| ||||| || | || |
Sbjct 520645 GGCAAGACCACCCAAAGAGTCACGGTCCAAGAAGTTAGTAGGCTCGTCCAGAACCAGCAA 520586
Query 354075 GTGCGGCTCCATCCACATTGCTGCAGCCAGAACTACCTTAACCTTCTGTCCGCCTGATAG 354134
||| || | ||||||| || | ||||| || ||||| |||||||| ||||| || ||
Sbjct 520585 GTGGGGGTTGTTCCACATGGCACCGGCCAGCACGACCTTGACCTTCTGACCGCCGGACAG 520526
Query 354135 TGCGTGAATCT 354145
|| |||||
Sbjct 520525 ACCGGAAATCT 520515
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471813300452836
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |