Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq2 134 2e-25
seq16 122 1e-21
seq12 114 2e-19
>seq2
Length=2385438
Score = 134 bits (148), Expect = 2e-25
Identities = 224/320 (70%), Gaps = 3/320 (1%)
Strand=Plus/Minus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || || || ||| |||||| |||||||||||||| | || |||||
Sbjct 270765 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGAGAGATA 270706
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
||||||| | ||| ||||||| | ||| ||| ||| | | ||||| | |
Sbjct 270705 GACTCCATGAAGTCGAAGGGGTTGGTGGCATTGAAGTACTTCTGGTTGCCGAGAGCGACC 270646
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
|| || ||||| ||||| ||||||||||| ||||||||||| |||||||||||| |
Sbjct 270645 AGGAGACGGTCAGCGACGAACTCGATGTATTGGCACATGAGCTTGGCGTTCATGCCAAGC 270586
Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930
|| || || || | || ||| ||||| | |||||| |||| |||||||| |||
Sbjct 270585 AGAGCACAGGGAAGGGCATCAGTCAGGAACTCCTGCTCGATGCCGACAGCCTCGACAATG 270526
Query 868931 ATCTGCCTGGGC-ACGTCGGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAGGC 868989
|| | ||| | || | || ||||| |||| ||| | | | ||||| |||||
Sbjct 270525 ATGT-CCTCAACAACCTTGGGGGAGGGGCGGTTGTTGAGGTGGGAGAAAAGCAGACAGGC 270467
Query 868990 AAAGTCGCAGTGCA-ACCCT 869008
|||||| ||| | |||||
Sbjct 270466 GAAGTCGGTGTGGAGACCCT 270447
Score = 125 bits (138), Expect = 9e-23
Identities = 110/137 (80%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106
||||||||||| || || ||||| ||||| |||||||| || | || || ||||||
Sbjct 1437115 GACAGCATCGGTGGAACCGTGACCTGCGTCATCCGCAACGTCCCCGTCGGTCTGGGCGAG 1437174
Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166
|| ||||| |||||| |||||||| |||||| ||||||||||| ||||| ||||||
Sbjct 1437175 CCCTGCTTCGACAAGCTCGAGGCCAAGCTCGCACACGCCATGCTCAGCATCCCCGCCACC 1437234
Query 19167 AAGGGATTCGAGATTGG 19183
||||| |||||||| ||
Sbjct 1437235 AAGGGTTTCGAGATCGG 1437251
Score = 107 bits (118), Expect = 2e-17
Identities = 179/254 (70%), Gaps = 5/254 (2%)
Strand=Plus/Minus
Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690
|||||||||||||||| || ||||||||| ||||| ||| | |||| | || |
Sbjct 270107 CCGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGGGCCTCGGGGACCT 270048
Query 869691 GGACCTCCTTCA-TGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCG 869749
| |||| || || |||| || | || ||||||| || || || ||| |||||||
Sbjct 270047 GAACCT-CTCCACTGAAACGCTCAAGCAAGTTCTCGTTGACAATACCATCGGAGGCGGCG 269989
Query 869750 AAAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAG 869806
|| ||||| |||||||| || ||||| ||||| |||||| | | ||| ||||
Sbjct 269988 AAGAAAGCAAGGACGTGGGAGACAAAGTAACGCTCATCGTCGTTCATGCGGTTGTGCCAG 269929
Query 869807 TGGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTT 869866
| | | || | || || | |||||| || ||||||| ||||||||||||||
Sbjct 269928 TCGTGGAGATCCTTGGACAGATCAATCTCCTCTGCAGTCCAGAAAGAGGCCTCGGCCTTC 269869
Query 869867 TTGTACATCTCCCA 869880
|||||||| | |||
Sbjct 269868 TTGTACATGTGCCA 269855
Score = 89.7 bits (98), Expect = 6e-12
Identities = 136/192 (71%), Gaps = 9/192 (5%)
Strand=Plus/Minus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||| || || ||| ||| | |||||| || | || || ||||| || || |||||
Sbjct 270451 ACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTCAGACCAGGCATCAGACCACGCTT 270392
Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298
||| ||||| ||||| | | || ||| ||||| ||||| ||||| |||||||||||
Sbjct 270391 CTTCAGCCAGAAGATAGAGGCAAAGGAGCCAGAGAAGAAGATACCCTCAACGGCGGCAAA 270332
Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTG---TTGATCCACTTCATCGC 869355
| | | || |||| ||| |||||| || ||||||| | |||||| || ||
Sbjct 270331 GGCAACCAGACGCTGGGCGAAGGTG--GA----CTCCTTGTCCTGGATCCAGCGGATGGC 270278
Query 869356 CCAGTCGGCCTT 869367
|||||| |||||
Sbjct 270277 CCAGTCAGCCTT 270266
>seq16
Length=763725
Score = 122 bits (134), Expect = 1e-21
Identities = 96/115 (83%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|| ||||||||| | || || ||| |||| || ||| |||| |||||| |||| ||||||
Sbjct 584079 GCTGCCAACTACTTGGATATTAAGGCTCTCCTGGATGTTGGTTGCAAGACTGTTGCCAAC 584020
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300
||||| ||||||||||| || |||||||||||||||||||| ||||| || |||
Sbjct 584019 ATGATTAAGGGCAAGTCTCCTGAGGAGATCCGCAAGACCTTCAACATTCAGAACG 583965
>seq12
Length=996256
Score = 114 bits (126), Expect = 2e-19
Identities = 284/436 (65%), Gaps = 8/436 (2%)
Strand=Plus/Minus
Query 1628169 GATCTCGGTGCACAGGTTGGC-CGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGTCA 1628227
|||||| ||||| ||||||| | || | ||||||||||||| ||||||| | |
Sbjct 677164 GATCTCAGTGCAAAGGTTGGAGCTGCGAA-TGGTACCCAGGTTCTTCTGGTTGCTCTTGC 677106
Query 1628228 GGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCGCGACGA 1628287
||||| || ||||||| |||||| |||| || ||||| |||| ||| ||| ||
Sbjct 677105 GGTTGCAAGCATCCTTGTAAAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCGAGGA 677046
Query 1628288 TGGCCGACCAGATCTGGCGCGCGGGCACGACAGTC---CGCGCGCGGCCCTNNNNNNNNN 1628344
|||| |||| | || | || | || ||| || | |||||||
Sbjct 677045 TGGCATACCACAGCTTCTGAGC---CTTGAAGGTCTTACGGCCACGGCCCTCCTTCTCGT 676989
Query 1628345 NNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCCTCGG 1628404
||||| || |||||||| ||| || || || ||||||
Sbjct 676988 ACTTCTCGTACAGAGCATCAAACTCCTCGCCGTAGACGTCGGCAAGACCAGGGGCCTCGT 676929
Query 1628405 ACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCACACG 1628464
|| || || || | |||||| || || | | | || ||| || || ||| |
Sbjct 676928 TGGGGCAGAACAGAGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAACAGATCAGGGG 676869
Query 1628465 TCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGA 1628524
||||||| ||| | ||||| || || || || ||||||||| ||||||||||| |
Sbjct 676868 TCCACAGAGCGAAGAAGAGATCACGAGCACGAACCTCCTCCTTACCGTGGTTCTTGCGCA 676809
Query 1628525 GGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 1628584
|||| | | |||| | |||||||||||| ||||| |||||| ||||||||| ||
Sbjct 676808 GGTCCAAGAACTCGAACACGTCGGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCGG 676749
Query 1628585 TGCGCTTGCCGCCGCC 1628600
||||||| ||| ||
Sbjct 676748 GGCGCTTGTTGCCACC 676733
Score = 113 bits (124), Expect = 6e-19
Identities = 205/300 (68%), Gaps = 0/300 (0%)
Strand=Plus/Minus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
||||||||| ||||| || |||| ||| || || || ||||| || |||| ||||||||
Sbjct 676732 CTGGTCGACATAGCGAGCGGTGTTGTTGAACACACGCAGCATAGGAACGATACCGTTGGA 676673
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
|||||||| || | | ||||| ||| | || || | ||| || |||||
Sbjct 676672 GGAACCGTTGGTACCGCCAATGTAGGAGCCAGTAGCACGGATGCGGTGGACGTTCAAGCC 676613
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
|| || || || | |||||| || | || || || || ||||| ||||| |||||
Sbjct 676612 AATACCACCAGCGGTCTTGGAAATCATGGCACAGGTCTTCAGAGTGTCATAGATACCCTC 676553
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
|| ||| ||||||| || || || ||||| || | ||| || | || ||
Sbjct 676552 AATGCTGTCCTCCTTCATATCAACCAGGAAGCAAGAAGCCAATTGGGGAGAAGGAGTACC 676493
Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364
||||||||| || ||||| | || |||||| |||| | | ||||| || ||||||
Sbjct 676492 GGCGTTGAACAGTGTGGGGGAAGCGTGGGTGAAGAACTTCTGGGACATCAAGTGGTAGGT 676433
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107120489252276
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |