Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq2 134 2e-25 seq16 122 1e-21 seq12 114 2e-19 >seq2 Length=2385438 Score = 134 bits (148), Expect = 2e-25 Identities = 224/320 (70%), Gaps = 3/320 (1%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| | || ||||| Sbjct 270765 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGAGAGATA 270706 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||||| | ||| ||||||| | ||| ||| ||| | | ||||| | | Sbjct 270705 GACTCCATGAAGTCGAAGGGGTTGGTGGCATTGAAGTACTTCTGGTTGCCGAGAGCGACC 270646 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || || ||||| ||||| ||||||||||| ||||||||||| |||||||||||| | Sbjct 270645 AGGAGACGGTCAGCGACGAACTCGATGTATTGGCACATGAGCTTGGCGTTCATGCCAAGC 270586 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || || | || ||| ||||| | |||||| |||| |||||||| ||| Sbjct 270585 AGAGCACAGGGAAGGGCATCAGTCAGGAACTCCTGCTCGATGCCGACAGCCTCGACAATG 270526 Query 868931 ATCTGCCTGGGC-ACGTCGGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAGGC 868989 || | ||| | || | || ||||| |||| ||| | | | ||||| ||||| Sbjct 270525 ATGT-CCTCAACAACCTTGGGGGAGGGGCGGTTGTTGAGGTGGGAGAAAAGCAGACAGGC 270467 Query 868990 AAAGTCGCAGTGCA-ACCCT 869008 |||||| ||| | ||||| Sbjct 270466 GAAGTCGGTGTGGAGACCCT 270447 Score = 125 bits (138), Expect = 9e-23 Identities = 110/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||| || || ||||| ||||| |||||||| || | || || |||||| Sbjct 1437115 GACAGCATCGGTGGAACCGTGACCTGCGTCATCCGCAACGTCCCCGTCGGTCTGGGCGAG 1437174 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| |||||||| |||||| ||||||||||| ||||| |||||| Sbjct 1437175 CCCTGCTTCGACAAGCTCGAGGCCAAGCTCGCACACGCCATGCTCAGCATCCCCGCCACC 1437234 Query 19167 AAGGGATTCGAGATTGG 19183 ||||| |||||||| || Sbjct 1437235 AAGGGTTTCGAGATCGG 1437251 Score = 107 bits (118), Expect = 2e-17 Identities = 179/254 (70%), Gaps = 5/254 (2%) Strand=Plus/Minus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 |||||||||||||||| || ||||||||| ||||| ||| | |||| | || | Sbjct 270107 CCGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGGGCCTCGGGGACCT 270048 Query 869691 GGACCTCCTTCA-TGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCG 869749 | |||| || || |||| || | || ||||||| || || || ||| ||||||| Sbjct 270047 GAACCT-CTCCACTGAAACGCTCAAGCAAGTTCTCGTTGACAATACCATCGGAGGCGGCG 269989 Query 869750 AAAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAG 869806 || ||||| |||||||| || ||||| ||||| |||||| | | ||| |||| Sbjct 269988 AAGAAAGCAAGGACGTGGGAGACAAAGTAACGCTCATCGTCGTTCATGCGGTTGTGCCAG 269929 Query 869807 TGGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTT 869866 | | | || | || || | |||||| || ||||||| |||||||||||||| Sbjct 269928 TCGTGGAGATCCTTGGACAGATCAATCTCCTCTGCAGTCCAGAAAGAGGCCTCGGCCTTC 269869 Query 869867 TTGTACATCTCCCA 869880 |||||||| | ||| Sbjct 269868 TTGTACATGTGCCA 269855 Score = 89.7 bits (98), Expect = 6e-12 Identities = 136/192 (71%), Gaps = 9/192 (5%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| || || ||| ||| | |||||| || | || || ||||| || || ||||| Sbjct 270451 ACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTCAGACCAGGCATCAGACCACGCTT 270392 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||| ||||| ||||| | | || ||| ||||| ||||| ||||| ||||||||||| Sbjct 270391 CTTCAGCCAGAAGATAGAGGCAAAGGAGCCAGAGAAGAAGATACCCTCAACGGCGGCAAA 270332 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTG---TTGATCCACTTCATCGC 869355 | | | || |||| ||| |||||| || ||||||| | |||||| || || Sbjct 270331 GGCAACCAGACGCTGGGCGAAGGTG--GA----CTCCTTGTCCTGGATCCAGCGGATGGC 270278 Query 869356 CCAGTCGGCCTT 869367 |||||| ||||| Sbjct 270277 CCAGTCAGCCTT 270266 >seq16 Length=763725 Score = 122 bits (134), Expect = 1e-21 Identities = 96/115 (83%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || ||||||||| | || || ||| |||| || ||| |||| |||||| |||| |||||| Sbjct 584079 GCTGCCAACTACTTGGATATTAAGGCTCTCCTGGATGTTGGTTGCAAGACTGTTGCCAAC 584020 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||| ||||||||||| || |||||||||||||||||||| ||||| || ||| Sbjct 584019 ATGATTAAGGGCAAGTCTCCTGAGGAGATCCGCAAGACCTTCAACATTCAGAACG 583965 >seq12 Length=996256 Score = 114 bits (126), Expect = 2e-19 Identities = 284/436 (65%), Gaps = 8/436 (2%) Strand=Plus/Minus Query 1628169 GATCTCGGTGCACAGGTTGGC-CGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGTCA 1628227 |||||| ||||| ||||||| | || | ||||||||||||| ||||||| | | Sbjct 677164 GATCTCAGTGCAAAGGTTGGAGCTGCGAA-TGGTACCCAGGTTCTTCTGGTTGCTCTTGC 677106 Query 1628228 GGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCGCGACGA 1628287 ||||| || ||||||| |||||| |||| || ||||| |||| ||| ||| || Sbjct 677105 GGTTGCAAGCATCCTTGTAAAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCGAGGA 677046 Query 1628288 TGGCCGACCAGATCTGGCGCGCGGGCACGACAGTC---CGCGCGCGGCCCTNNNNNNNNN 1628344 |||| |||| | || | || | || ||| || | ||||||| Sbjct 677045 TGGCATACCACAGCTTCTGAGC---CTTGAAGGTCTTACGGCCACGGCCCTCCTTCTCGT 676989 Query 1628345 NNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCCTCGG 1628404 ||||| || |||||||| ||| || || || |||||| Sbjct 676988 ACTTCTCGTACAGAGCATCAAACTCCTCGCCGTAGACGTCGGCAAGACCAGGGGCCTCGT 676929 Query 1628405 ACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCACACG 1628464 || || || || | |||||| || || | | | || ||| || || ||| | Sbjct 676928 TGGGGCAGAACAGAGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAACAGATCAGGGG 676869 Query 1628465 TCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGA 1628524 ||||||| ||| | ||||| || || || || ||||||||| ||||||||||| | Sbjct 676868 TCCACAGAGCGAAGAAGAGATCACGAGCACGAACCTCCTCCTTACCGTGGTTCTTGCGCA 676809 Query 1628525 GGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 1628584 |||| | | |||| | |||||||||||| ||||| |||||| ||||||||| || Sbjct 676808 GGTCCAAGAACTCGAACACGTCGGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCGG 676749 Query 1628585 TGCGCTTGCCGCCGCC 1628600 ||||||| ||| || Sbjct 676748 GGCGCTTGTTGCCACC 676733 Score = 113 bits (124), Expect = 6e-19 Identities = 205/300 (68%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||||||||| ||||| || |||| ||| || || || ||||| || |||| |||||||| Sbjct 676732 CTGGTCGACATAGCGAGCGGTGTTGTTGAACACACGCAGCATAGGAACGATACCGTTGGA 676673 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 |||||||| || | | ||||| ||| | || || | ||| || ||||| Sbjct 676672 GGAACCGTTGGTACCGCCAATGTAGGAGCCAGTAGCACGGATGCGGTGGACGTTCAAGCC 676613 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 || || || || | |||||| || | || || || || ||||| ||||| ||||| Sbjct 676612 AATACCACCAGCGGTCTTGGAAATCATGGCACAGGTCTTCAGAGTGTCATAGATACCCTC 676553 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || ||| ||||||| || || || ||||| || | ||| || | || || Sbjct 676552 AATGCTGTCCTCCTTCATATCAACCAGGAAGCAAGAAGCCAATTGGGGAGAAGGAGTACC 676493 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 ||||||||| || ||||| | || |||||| |||| | | ||||| || |||||| Sbjct 676492 GGCGTTGAACAGTGTGGGGGAAGCGTGGGTGAAGAACTTCTGGGACATCAAGTGGTAGGT 676433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107120489252276