Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq12 129 9e-24 seq2 118 2e-20 seq11 116 6e-20 seq16 104 4e-16 >seq12 Length=996256 Score = 129 bits (142), Expect = 9e-24 Identities = 290/437 (66%), Gaps = 10/437 (2%) Strand=Plus/Minus Query 2071581 GACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTTGCTGGTC 2071638 || ||| ||||| ||||||| | || |||| |||||||||| ||||||||| | Sbjct 677164 GATCTCAGTGCAAAGGTTGGAG--CTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTG 677107 Query 2071639 AGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACG 2071698 ||||| || ||||||| |||||| |||| ||| ||||| |||| ||| || | Sbjct 677106 CGGTTGCAAGCATCCTTGTAAAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCGAGG 677047 Query 2071699 ATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCT-CG--CGCGGCCCTNNNNNNNN 2071755 ||||| |||| | | | || | ||||| | || | ||||||| Sbjct 677046 ATGGCATACCACAGCTTCTGAGCCTTGA---AGGTCTTACGGCCACGGCCCTCCTTCTCG 676990 Query 2071756 NNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCG 2071815 | || || ||||| | |||||| | ||| || || || |||||| Sbjct 676989 TACTTCTCGTACAGAGCATCAAACTCCTCGCCGTAGACGTCGGCAAGACCAGGGGCCTCG 676930 Query 2071816 GACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCAC 2071875 ||||| || || | |||||| ||| | | | || || ||| ||||| || Sbjct 676929 TTGGGGCAGAACAGAGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAACAGATCAGGG 676870 Query 2071876 GTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTC 2071935 |||||||| || | |||||||| || || || ||||||||| ||||||||||| | Sbjct 676869 GTCCACAGAGCGAAGAAGAGATCACGAGCACGAACCTCCTCCTTACCGTGGTTCTTGCGC 676810 Query 2071936 AGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCC 2071995 ||||| | | |||| | |||||||||||| ||||| |||||| ||||||||| || Sbjct 676809 AGGTCCAAGAACTCGAACACGTCGGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCG 676750 Query 2071996 TTGCGCTTGCCGCCGCC 2072012 ||||||| ||| || Sbjct 676749 GGGCGCTTGTTGCCACC 676733 Score = 100 bits (110), Expect = 5e-15 Identities = 177/258 (69%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||||||||| || |||| ||| || || || ||||| || || | |||||||| Sbjct 676732 CTGGTCGACATAGCGAGCGGTGTTGTTGAACACACGCAGCATAGGAACGATACCGTTGGA 676673 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 |||||||| || | | ||||| ||| | || || | ||| || ||||| Sbjct 676672 GGAACCGTTGGTACCGCCAATGTAGGAGCCAGTAGCACGGATGCGGTGGACGTTCAAGCC 676613 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || || || || | |||||| || | || || | ||||| || || ||||| ||||| Sbjct 676612 AATACCACCAGCGGTCTTGGAAATCATGGCACAGGTCTTCAGAGTGTCATAGATACCCTC 676553 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || ||| ||||||| || | ||| ||||| || | ||| || | || || Sbjct 676552 AATGCTGTCCTCCTTCATATCAACCAGGAAGCAAGAAGCCAATTGGGGAGAAGGAGTACC 676493 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 ||| ||||| || ||||| Sbjct 676492 GGCGTTGAACAGTGTGGG 676475 >seq2 Length=2385438 Score = 118 bits (130), Expect = 2e-20 Identities = 176/250 (70%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| |||||| |||||||||||||| | | Sbjct 270773 TGACACCGGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCA 270714 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 | ||||| ||||||| | ||| ||||||| | | ||| ||||| | |||| Sbjct 270713 GAGAGATAGACTCCATGAAGTCGAAGGGGTTGGTGGCATTGAAGTACTTCTGGTTGCCGA 270654 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | | || || ||||| |||||||| || ||||| ||||||||||| |||||||| Sbjct 270653 GAGCGACCAGGAGACGGTCAGCGACGAACTCGATGTATTGGCACATGAGCTTGGCGTTCA 270594 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 |||| | || || ||| || | || | | ||||| | |||||| |||| |||| Sbjct 270593 TGCCAAGCAGAGCACAGGGAAGGGCATCAGTCAGGAACTCCTGCTCGATGCCGACAGCCT 270534 Query 794131 CGATGATGAT 794140 ||| ||||| Sbjct 270533 CGACAATGAT 270524 >seq11 Length=1011714 Score = 116 bits (128), Expect = 6e-20 Identities = 81/92 (88%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||||||||||||||||||||| || ||||||||| |||| || |||||| | | Sbjct 1001308 GTACTTGGTGACGGCCTTGGTACCCTCAGACACGGCGTGCTTGGCAAGCTCGCCGGGGAG 1001249 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 ||||||||| |||| |||||||||||| |||| Sbjct 1001248 GATCAGGCGGACGGAGGTCTGGATCTCACGGG 1001217 >seq16 Length=763725 Score = 104 bits (114), Expect = 4e-16 Identities = 92/115 (80%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || ||||||||| | || || ||| | ||||| ||| | || |||||||| || |||||| Sbjct 584079 GCTGCCAACTACTTGGATATTAAGGCTCTCCTGGATGTTGGTTGCAAGACTGTTGCCAAC 584020 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | || ||||||||||| || ||||| |||||||||||||| ||||| || ||| Sbjct 584019 ATGATTAAGGGCAAGTCTCCTGAGGAGATCCGCAAGACCTTCAACATTCAGAACG 583965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916222146600092