Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq1 125 5e-24
seq10 102 5e-17
>seq1
Length=4666273
Score = 125 bits (138), Expect = 5e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||||||||| |||| ||||||||| ||||| || ||||| || |||| ||||
Sbjct 4323968 AGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCC 4323909
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|||| |||||||| ||||||||||| || |||||||| | || | |||||||||||
Sbjct 4323908 TCCAACTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCC 4323849
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || | |||||| || | || || |||
Sbjct 4323848 TGAATCTTGCTCTTGACGTTGTCGATGGTATCGGAAGACTCGACTTCCAAAGTGATAGTC 4323789
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || || ||||| || ||||| |||||
Sbjct 4323788 TTGCCAGTAAGAGTCTTGACGAAGATTTGCAT 4323757
Score = 118 bits (130), Expect = 7e-22
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
|||||||| |||| || |||||||| ||||| ||||| || || |||| | ||
Sbjct 4323614 CAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTC 4323555
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| || |||||||| || || |||||||| | || | |||||||||||
Sbjct 4323554 CTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTC 4323495
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || |||||| | || | ||| || ||| || || | ||| || ||
Sbjct 4323494 TTGGATCTTGCTCTTGACGTTGTCGATAGTATCAGAGGACTCCACCTCCAGGGTAATAGT 4323435
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||| ||||||||||| || |||||||||||
Sbjct 4323434 CTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 4323402
Score = 105 bits (116), Expect = 4e-18
Identities = 140/192 (73%), Gaps = 8/192 (4%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | ||| ||||||||| ||||| ||||| || ||| | || ||||
Sbjct 4323157 AGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGGCCATCC 4323098
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| |||||||||||||| || |||||||| | || | |||||||||||
Sbjct 4323097 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCC 4323038
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || ||||| || | ||||| ||| || ||| || || | ||| ||
Sbjct 4323037 TGGATCTTAGACTTGAC--AT--TGTCGATGGTGTCAGAGGACTCAACCTCCAAGGTGAT 4322982
Query 34942 GGTCTTTCCCGT 34953
|||||| || ||
Sbjct 4322981 GGTCTTGCCAGT 4322970
Score = 102 bits (112), Expect = 5e-17
Identities = 94/119 (79%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| |||| ||| ||||| ||||| |||||||| || |||| ||||
Sbjct 3064411 AGGACGAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCC 3064470
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| || ||||||||||| || |||||||| | || | |||||||||||
Sbjct 3064471 TCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTC 3064529
>seq10
Length=1051362
Score = 102 bits (112), Expect = 5e-17
Identities = 131/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
||||||| ||||| ||||| || |||| |||| || || ||||| ||||||||||
Sbjct 358835 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 358776
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
|||| |||||||| || | || | ||||||||||| | || || ||||||
Sbjct 358775 TCAGACGTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 358716
Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967
| || | || | | |||||| || | ||| |||||||| ||||| |||||||| || |
Sbjct 358715 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 358656
Query 34968 A 34968
|
Sbjct 358655 A 358655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325691894981132
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |