Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1 102 5e-17 >seq1 Length=4666273 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||| | |||||||| ||||| || || || |||||||| ||||| Sbjct 4323401 ACCACCACGCAGACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGA 4323342 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| |||| || | || || || || || || | ||||||||| || | || Sbjct 4323341 GAGAGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 4323282 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| || ||||| || || |||| ||| ||| | ||||||| || || | Sbjct 4323281 GATACCCTCCTTGTCCTGGATCTTGGACTTCA-CATTGTCGATGGTGTCGGAAGACTCAA 4323223 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| ||||| || || || || | || || || |||||||||||| Sbjct 4323222 CCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATA 4323173 Score = 95.1 bits (104), Expect = 8e-15 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || ||| | |||| || || ||| ||| || || ||||||||||| ||| Sbjct 4323983 CCACCGCGCAGACGGAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAG 4323924 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || ||||| || ||||| || || |||| ||||||||| || | || Sbjct 4323923 AGAGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGAGGG 4323864 Query 33643 ACACCTTCTTTGTCGGCAAT-TTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| || ||||| ||| || || || || | ||| | ||| ||| || || | Sbjct 4323863 ATACCCTCCTTGTCCTGAATCTTGCTCTT--GACGTTGTCGATGGTATCGGAAGACTCGA 4323806 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || || || || | || || || ||||| |||||| Sbjct 4323805 CTTCCAAAGTGATAGTCTTGCCAGTAAGAGTCTTGACGAAGATTTGCATA 4323756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703086613760