Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1 113 1e-19 >seq1 Length=4666273 Score = 113 bits (124), Expect = 1e-19 Identities = 142/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || || || || || |||||||||||||| || ||| || || |||| Sbjct 4323771 CAAGACTCTTACTGGCAAGACTATCACTTTGGAAGTCGAGTCTTCCGATACCATCGACAA 4323830 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| |||||||| || || || || || |||||| || | || ||||| Sbjct 4323831 CGTCAAGAGCAAGATTCAGGACAAGGAGGGTATCCCTCCGGACCAGCAGCGTCTGATCTT 4323890 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| |||||||||||||| ||||| | ||| | | ||||||||| ||||||| ||||| Sbjct 4323891 CGCTGGAAAGCAGTTGGAGGATGGTCGCACTCTCTCGGATTACAACATCCAGAAGGAGTC 4323950 Query 206364 TACTCTTCACCTTGT 206378 || |||||||| || Sbjct 4323951 CACCCTTCACCTGGT 4323965 Score = 91.5 bits (100), Expect = 3e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| ||||| || || || |||| ||||| ||||| Sbjct 4323405 CAGATCTTCGTCAAGACCCTCACTGGAAAGACTATTACCCTGGAGGTGGAGTCCTCTGAT 4323464 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| ||||| || || || || |||||| || Sbjct 4323465 ACTATCGACAACGTCAAGAGCAAGATCCAAGACAAGGAGGGTATCCCCCCGGACCAGCAG 4323524 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || |||||||| || |||||| | || || || | ||| | |||| |||||| || Sbjct 4323525 CGTCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGTCGCACTCTCTCCGACTACAACATC 4323584 Query 206353 CAGAAAGAGTCTACTCTTCA 206372 ||||| || ||||||||||| Sbjct 4323585 CAGAAGGAATCTACTCTTCA 4323604 Score = 86.0 bits (94), Expect = 1e-11 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || || |||||| | || || || ||| ||| Sbjct 4323177 CAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTTGAGTCTTCCGAC 4323236 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || || || |||||| || Sbjct 4323237 ACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAG 4323296 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || |||||||| || |||||| | || || || | ||| | |||| |||||| || Sbjct 4323297 CGTCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGTCGCACTCTCTCCGACTACAACATC 4323356 Query 206353 CAGAAAGAGTCTACTCTTCA 206372 ||||| || ||||||||||| Sbjct 4323357 CAGAAGGAATCTACTCTTCA 4323376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181817347605988