Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq1 113 1e-19
>seq1
Length=4666273
Score = 113 bits (124), Expect = 1e-19
Identities = 142/195 (73%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || || || || || || |||||||||||||| || ||| || || ||||
Sbjct 4323771 CAAGACTCTTACTGGCAAGACTATCACTTTGGAAGTCGAGTCTTCCGATACCATCGACAA 4323830
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| |||||||| || || || || || |||||| || | || |||||
Sbjct 4323831 CGTCAAGAGCAAGATTCAGGACAAGGAGGGTATCCCTCCGGACCAGCAGCGTCTGATCTT 4323890
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||| |||||||||||||| ||||| | ||| | | ||||||||| ||||||| |||||
Sbjct 4323891 CGCTGGAAAGCAGTTGGAGGATGGTCGCACTCTCTCGGATTACAACATCCAGAAGGAGTC 4323950
Query 206364 TACTCTTCACCTTGT 206378
|| |||||||| ||
Sbjct 4323951 CACCCTTCACCTGGT 4323965
Score = 91.5 bits (100), Expect = 3e-13
Identities = 140/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || ||||| ||||| || || || |||| ||||| |||||
Sbjct 4323405 CAGATCTTCGTCAAGACCCTCACTGGAAAGACTATTACCCTGGAGGTGGAGTCCTCTGAT 4323464
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| ||||| || || || || |||||| ||
Sbjct 4323465 ACTATCGACAACGTCAAGAGCAAGATCCAAGACAAGGAGGGTATCCCCCCGGACCAGCAG 4323524
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || |||||||| || |||||| | || || || | ||| | |||| |||||| ||
Sbjct 4323525 CGTCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGTCGCACTCTCTCCGACTACAACATC 4323584
Query 206353 CAGAAAGAGTCTACTCTTCA 206372
||||| || |||||||||||
Sbjct 4323585 CAGAAGGAATCTACTCTTCA 4323604
Score = 86.0 bits (94), Expect = 1e-11
Identities = 139/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || ||||| || || || |||||| | || || || ||| |||
Sbjct 4323177 CAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTTGAGTCTTCCGAC 4323236
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| || || || || || || |||||| ||
Sbjct 4323237 ACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAG 4323296
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || |||||||| || |||||| | || || || | ||| | |||| |||||| ||
Sbjct 4323297 CGTCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGTCGCACTCTCTCCGACTACAACATC 4323356
Query 206353 CAGAAAGAGTCTACTCTTCA 206372
||||| || |||||||||||
Sbjct 4323357 CAGAAGGAATCTACTCTTCA 4323376
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181817347605988
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |