Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq2 125 1e-22 seq12 104 3e-16 >seq2 Length=2385438 Score = 125 bits (138), Expect = 1e-22 Identities = 213/303 (70%), Gaps = 13/303 (4%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || |||||||||||||| || ||||| || |||||| | || | Sbjct 269851 GATCTGGCACATGTAC-AAGAAGGCCGAGGCCTCTTTCTGGACTGCAGAGGAGATTGATC 269909 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887 | | || |||| ||||| ||| ||| |||||| ||||| | || Sbjct 269910 TGTCCAAGGATCTCCACG----ACTGGCACAACCGCATGAACGACGATGAGCGTTACTTT 269965 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 || |||||||| || ||| ||||||||| |||||| || || ||||||| || Sbjct 269966 GTCTCCCACGTCCTTGC-TTTCTTCGCCGCCTCCGATGGTATTGTCAACGAGAACTTGCT 270024 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 | || || | |||||| || | || ||||| || | || ||||| |||||||| Sbjct 270025 TGAGCGTTTCAGTGGAGAGGTTCAGGTCCCCGAGGCCCGCTGCTTCTACGGTTTCCAGAT 270084 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 | || || ||||||||||| || |||||||| || || || || |||||| ||||||| Sbjct 270085 CATGATGGAGAACATCCACTCGGAGACCTACTCCCTGCTCATTGATACCTACATCAAGGA 270144 Query 1456068 CCC 1456070 || Sbjct 270145 GCC 270147 Score = 116 bits (128), Expect = 5e-20 Identities = 222/322 (69%), Gaps = 4/322 (1%) Strand=Plus/Plus Query 1456460 GACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCGACCGACGTGCCCAAG 1456519 ||||| ||||||||||| | | | ||| |||| || || || | || || Sbjct 270461 GACTTCGCCTGTCTGCTTTTCTCCCACCTCAACAACCGCCCCTCCCCCAAGGTTGTTGAG 270520 Query 1456520 CAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTG 1456579 | ||||| |||||||| |||| |||||| | ||||| | | || | || || Sbjct 270521 GACATCATTGTCGAGGCTGTCGGCATCGAGCAGGAGTTCCTGACTGATGCCCTTCCCTGT 270580 Query 1456580 GCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACC 1456639 || || | ||||||||||||| |||||||||||| ||||| || || ||||| |||| Sbjct 270581 GCTCTGCTTGGCATGAACGCCAA-GCTCATGTGCCAATACATCGAGTTC-GTCGCTGACC 270638 Query 1456640 GCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGG 1456699 | || || | || |||||| | ||||| ||| | | ||||||| ||| | Sbjct 270639 GTCTCCTGGTCGCTCTCGGCAACC-AGAAGTACTTCAATGCCACCAACCCCTTCGACTTC 270697 Query 1456700 ATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTAC 1456758 ||||||| ||||| || | |||||||||||||| |||||| || || || || ||| Sbjct 270698 ATGGAGTCTATCTCTCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTAC 270757 Query 1456759 GCCAAGGCCGGCGTCACCGCCA 1456780 |||||||| |||| |||| Sbjct 270758 CAGAAGGCCGGTGTCATGGCCA 270779 >seq12 Length=996256 Score = 104 bits (114), Expect = 3e-16 Identities = 198/290 (68%), Gaps = 4/290 (1%) Strand=Plus/Plus Query 259895 ATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGC 259954 ||||| ||| |||| |||||| || | ||||| || || || ||||| || || Sbjct 676445 ATGTCCCAGAAGTTCTTCACCCACGCTTCCCCCACACTGTTCAACGCCGGTACTCCTTCT 676504 Query 259955 CCGCAGAATTCG--TCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCT 260012 || || ||| | || ||||| ||| | || ||||||| || || ||||| |||| Sbjct 676505 CCCCA--ATTGGCTTCTTGCTTCCTGGTTGATATGAAGGAGGACAGCATTGAGGGTATCT 676562 Query 260013 ATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCG 260072 ||||||| || ||| || || | || |||||| | || || || || || || || Sbjct 676563 ATGACACTCTGAAGACCTGTGCCATGATTTCCAAGACCGCTGGTGGTATTGGCTTGAACG 676622 Query 260073 CACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCC 260132 ||| | || || | ||| ||||| | | || |||||||| |||||||| Sbjct 676623 TCCACCGCATCCGTGCTACTGGCTCCTACATTGGCGGTACCAACGGTTCCTCCAACGGTA 676682 Query 260133 TTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 | || || ||||| || || || ||| |||| || ||||| ||||||||| Sbjct 676683 TCGTTCCTATGCTGCGTGTGTTCAACAACACCGCTCGCTATGTCGACCAG 676732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177789208980936