Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq2 125 1e-22
seq12 104 3e-16
>seq2
Length=2385438
Score = 125 bits (138), Expect = 1e-22
Identities = 213/303 (70%), Gaps = 13/303 (4%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| | |||||| || |||||||||||||| || ||||| || |||||| | || |
Sbjct 269851 GATCTGGCACATGTAC-AAGAAGGCCGAGGCCTCTTTCTGGACTGCAGAGGAGATTGATC 269909
Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887
| | || |||| ||||| ||| ||| |||||| ||||| | ||
Sbjct 269910 TGTCCAAGGATCTCCACG----ACTGGCACAACCGCATGAACGACGATGAGCGTTACTTT 269965
Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947
|| |||||||| || ||| ||||||||| |||||| || || ||||||| ||
Sbjct 269966 GTCTCCCACGTCCTTGC-TTTCTTCGCCGCCTCCGATGGTATTGTCAACGAGAACTTGCT 270024
Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007
| || || | |||||| || | || ||||| || | || ||||| ||||||||
Sbjct 270025 TGAGCGTTTCAGTGGAGAGGTTCAGGTCCCCGAGGCCCGCTGCTTCTACGGTTTCCAGAT 270084
Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067
| || || ||||||||||| || |||||||| || || || || |||||| |||||||
Sbjct 270085 CATGATGGAGAACATCCACTCGGAGACCTACTCCCTGCTCATTGATACCTACATCAAGGA 270144
Query 1456068 CCC 1456070
||
Sbjct 270145 GCC 270147
Score = 116 bits (128), Expect = 5e-20
Identities = 222/322 (69%), Gaps = 4/322 (1%)
Strand=Plus/Plus
Query 1456460 GACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCGACCGACGTGCCCAAG 1456519
||||| ||||||||||| | | | ||| |||| || || || | || ||
Sbjct 270461 GACTTCGCCTGTCTGCTTTTCTCCCACCTCAACAACCGCCCCTCCCCCAAGGTTGTTGAG 270520
Query 1456520 CAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTG 1456579
| ||||| |||||||| |||| |||||| | ||||| | | || | || ||
Sbjct 270521 GACATCATTGTCGAGGCTGTCGGCATCGAGCAGGAGTTCCTGACTGATGCCCTTCCCTGT 270580
Query 1456580 GCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACC 1456639
|| || | ||||||||||||| |||||||||||| ||||| || || ||||| ||||
Sbjct 270581 GCTCTGCTTGGCATGAACGCCAA-GCTCATGTGCCAATACATCGAGTTC-GTCGCTGACC 270638
Query 1456640 GCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGG 1456699
| || || | || |||||| | ||||| ||| | | ||||||| ||| |
Sbjct 270639 GTCTCCTGGTCGCTCTCGGCAACC-AGAAGTACTTCAATGCCACCAACCCCTTCGACTTC 270697
Query 1456700 ATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTAC 1456758
||||||| ||||| || | |||||||||||||| |||||| || || || || |||
Sbjct 270698 ATGGAGTCTATCTCTCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTAC 270757
Query 1456759 GCCAAGGCCGGCGTCACCGCCA 1456780
|||||||| |||| ||||
Sbjct 270758 CAGAAGGCCGGTGTCATGGCCA 270779
>seq12
Length=996256
Score = 104 bits (114), Expect = 3e-16
Identities = 198/290 (68%), Gaps = 4/290 (1%)
Strand=Plus/Plus
Query 259895 ATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGC 259954
||||| ||| |||| |||||| || | ||||| || || || ||||| || ||
Sbjct 676445 ATGTCCCAGAAGTTCTTCACCCACGCTTCCCCCACACTGTTCAACGCCGGTACTCCTTCT 676504
Query 259955 CCGCAGAATTCG--TCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCT 260012
|| || ||| | || ||||| ||| | || ||||||| || || ||||| ||||
Sbjct 676505 CCCCA--ATTGGCTTCTTGCTTCCTGGTTGATATGAAGGAGGACAGCATTGAGGGTATCT 676562
Query 260013 ATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCG 260072
||||||| || ||| || || | || |||||| | || || || || || || ||
Sbjct 676563 ATGACACTCTGAAGACCTGTGCCATGATTTCCAAGACCGCTGGTGGTATTGGCTTGAACG 676622
Query 260073 CACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCC 260132
||| | || || | ||| ||||| | | || |||||||| ||||||||
Sbjct 676623 TCCACCGCATCCGTGCTACTGGCTCCTACATTGGCGGTACCAACGGTTCCTCCAACGGTA 676682
Query 260133 TTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182
| || || ||||| || || || ||| |||| || ||||| |||||||||
Sbjct 676683 TCGTTCCTATGCTGCGTGTGTTCAACAACACCGCTCGCTATGTCGACCAG 676732
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177789208980936
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |