Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1 107 2e-18 seq10 91.5 1e-13 >seq1 Length=4666273 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || |||||||| | ||| ||||| || |||||||| |||| Sbjct 4323400 CCACCACGCAGACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAG 4323341 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || |||| || ||||||||||| || || || | ||||||||||||| || Sbjct 4323340 AGAGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 4323281 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||||| |||||| ||||| | | | | |||||| || || ||| Sbjct 4323280 ATACCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGAAGACTCAACC 4323221 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || || || | || || || || |||||||| Sbjct 4323220 TCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4323174 Score = 95.1 bits (104), Expect = 1e-14 Identities = 123/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || | || ||||||||||| || || || Sbjct 4323137 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCGAA 4323078 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||||| ||| | || |||||||||| |||||| ||| | | | Sbjct 4323077 GATCAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTAGACTTGACATT 4323018 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714 | | ||||| || || ||||||| ||||| || || || |||| Sbjct 4323017 GTCGATGGTGTCAGAGGACTCAACCTCCAAGGTGATGGTCTTGCCAGTCA 4322968 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || |||||||| | ||| ||||| || |||||||| |||| Sbjct 4323628 CCACCACGCAGACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAG 4323569 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || |||| || ||||||||||| || || || | ||||||||||||| || Sbjct 4323568 AGAGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 4323509 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | ||||||||| |||||| ||| | |||| | | || || || ||||| Sbjct 4323508 ATACCCTCCTTGTCTTGGATCTTGCTCTTGA-CGTTGTCGATAGTATCAGAGGACTCCAC 4323450 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| || || || || || || | || || || || |||||||| Sbjct 4323449 CTCCAGGGTAATAGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 4323402 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||| | | || || | || |||| |||||| || || || Sbjct 4323948 CTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCCTCCAACTGCTTTCCAGCGAA 4323889 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||||| ||| | | |||||||||| ||||| ||| | || Sbjct 4323888 GATCAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGAATCTTGCTCTTGA-CGT 4323830 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | || ||| || || || |||| ||||| || || || || | ||| || | Sbjct 4323829 TGTCGATGGTATCGGAAGACTCGACTTCCAAAGTGATAGTCTTGCCAGTAAGAGTCTTGA 4323770 Query 35724 CAAATATCTGCAT 35736 | || || ||||| Sbjct 4323769 CGAAGATTTGCAT 4323757 >seq10 Length=1051362 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/182 (72%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| || |||||||| ||| || || || | || || |||||||| || || || | Sbjct 358835 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 358776 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 ||| || ||||| |||| |||| || |||||||||| |||||| ||| | |||| Sbjct 358775 TCAGACGTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGAC-GTTG 358717 Query 35667 CC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||||||||| || || || | || || || |||||||||| || || || Sbjct 358716 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 358657 Query 35726 AA 35727 || Sbjct 358656 AA 358655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450792315238240