Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq2 102 1e-16
seq12 100 4e-16
>seq2
Length=2385438
Score = 102 bits (112), Expect = 1e-16
Identities = 112/149 (75%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676
||||||||||| || || |||||||| | | || | ||||| || || || ||
Sbjct 270471 CAGGCGAAGTCGGTGTGGAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTCAGA 270412
Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAG 39736
|||||||| ||||||||||| || ||||| || || | ||||| || ||||| ||||||
Sbjct 270411 CCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATAGAGGCAAAGGAGCCAGAGAAGAAG 270352
Query 39737 ATGCCTTCTACTGCTGCAAATGCAACAAG 39765
|| || || || || ||||| ||||| ||
Sbjct 270351 ATACCCTCAACGGCGGCAAAGGCAACCAG 270323
>seq12
Length=996256
Score = 100 bits (110), Expect = 4e-16
Identities = 548/870 (63%), Gaps = 16/870 (2%)
Strand=Plus/Minus
Query 69352 ATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAAC 69411
|| || ||||| || | ||| || ||||| ||| || || ||||||||||| || ||
Sbjct 677136 ATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAAAGCATGAAG 677077
Query 69412 GGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAAC-----GACCCTAGCAT 69466
|| ||||||| ||| |||||| |||| || | | ||| | || ||| | |
Sbjct 677076 GGGTTACCAGTCTCAGTCTGAGCCTCGAGGATGGCATACCACAGCTTCTGAGCCTTGAAG 677017
Query 69467 TTATTACGGTCTTGTAACGCTTCTCTTTTTCATA-TTGT-GTATATAGCCGTTCGAATTC 69524
| |||||| | ||| ||| || || || || | ||| | ||| || || ||
Sbjct 677016 GTCTTACGGCC-----ACGGCCCTCCTTCTCGTACTTCTCGTACAGAGCA--TCAAACTC 676964
Query 69525 ATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATC 69584
|| || | || || | | ||||| || || || || | || | ||| || |
Sbjct 676963 CTCGCCGTAGACGTCGGCAAGACCAGGGGCCTCGTTGGGGCAGAACAGAGTCCAGTCACC 676904
Query 69585 ATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCT 69644
| ||| ||| || ||||| || ||||| || |||| ||||| | |||||||| |
Sbjct 676903 GTTGGCCTCAACACGCTTCATGAACAGATCAGGGGTCCACAGAGCGAAGAAGAGATCACG 676844
Query 69645 GGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGA 69704
| | | || || || || || || || || | ||||| | | || |
Sbjct 676843 AGCACGAACCTCCTCCTTACCGTGGTTCTTGCGCAGGTCCAAGAACTCGAACACGTCGGC 676784
Query 69705 ATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTAT 69764
||||| || || || || || || | | | || || || || || || ||||| || |
Sbjct 676783 GTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGAC 676724
Query 69765 GTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATT 69824
|| | || ||||| || | || | |||||| |||| ||||| || || ||| ||
Sbjct 676723 ATAGCGAGCGGTGTTGTTGAACACACGCAGCATAGGAACGATACCGTTGGAGGAACCGTT 676664
Query 69825 TGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCC 69884
|| || ||| || || | || || || | | || || || ||
Sbjct 676663 GGTACCGCCAATGTAGGAGCCAGTAGCACGGATGCGGTGGACGTTCAAGCCAATACCACC 676604
Query 69885 TGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATC 69944
|| | || || || | ||||| |||| |||||||| |||||||| ||||| ||
Sbjct 676603 AGCGGTCTTGGAAATCATGGCACAGGTCTTCAGAGTGTCATAGATACCCTCAATGCTGTC 676544
Query 69945 ATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAA 70004
|| |||| | || || || || || || ||| || ||| || || || ||
Sbjct 676543 CTCCTTCATATCAACCAGGAAGCAAGAAGCCAATTGGGGAGAAGGAGTACCGGCGTTGAA 676484
Query 70005 TAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGC 70064
| ||| || || ||||| ||||| | || | || | || | ||| || ||||| ||
Sbjct 676483 CAGTGTGGGGGAAGCGTGGGTGAAGAACTTCTGGGACATCAAGTGGTAGGTCTCAATGGC 676424
Query 70065 TGATTCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTC 70123
||| |||||| ||| | || || || | || ||||||||||||| ||||| || |
Sbjct 676423 CTTTTCGATATCCTCACCG-TGGATACCAACTGCAACACGCATCAACAGGTGCTGGGGAC 676365
Query 70124 GTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAA 70183
| || | ||| || || | ||||||||| || || || || || ||||
Sbjct 676364 GCTCAGCAACCTTACCGTTGATGCGGAGCAGGTATGAACGCTCGAGGGTCTTGAAACCAA 676305
Query 70184 AATAGTTGTATGAAAAGTCTCTTTCGTAAA 70213
| ||||||| |||||| | |||||||
Sbjct 676304 AGAAGTTGTAGTTAAAGTCACGGTCGTAAA 676275
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686906842309920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |