Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq2 102 1e-16 seq12 100 4e-16 >seq2 Length=2385438 Score = 102 bits (112), Expect = 1e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676 ||||||||||| || || |||||||| | | || | ||||| || || || || Sbjct 270471 CAGGCGAAGTCGGTGTGGAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTCAGA 270412 Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAG 39736 |||||||| ||||||||||| || ||||| || || | ||||| || ||||| |||||| Sbjct 270411 CCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATAGAGGCAAAGGAGCCAGAGAAGAAG 270352 Query 39737 ATGCCTTCTACTGCTGCAAATGCAACAAG 39765 || || || || || ||||| ||||| || Sbjct 270351 ATACCCTCAACGGCGGCAAAGGCAACCAG 270323 >seq12 Length=996256 Score = 100 bits (110), Expect = 4e-16 Identities = 548/870 (63%), Gaps = 16/870 (2%) Strand=Plus/Minus Query 69352 ATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAAC 69411 || || ||||| || | ||| || ||||| ||| || || ||||||||||| || || Sbjct 677136 ATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAAAGCATGAAG 677077 Query 69412 GGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAAC-----GACCCTAGCAT 69466 || ||||||| ||| |||||| |||| || | | ||| | || ||| | | Sbjct 677076 GGGTTACCAGTCTCAGTCTGAGCCTCGAGGATGGCATACCACAGCTTCTGAGCCTTGAAG 677017 Query 69467 TTATTACGGTCTTGTAACGCTTCTCTTTTTCATA-TTGT-GTATATAGCCGTTCGAATTC 69524 | |||||| | ||| ||| || || || || | ||| | ||| || || || Sbjct 677016 GTCTTACGGCC-----ACGGCCCTCCTTCTCGTACTTCTCGTACAGAGCA--TCAAACTC 676964 Query 69525 ATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATC 69584 || || | || || | | ||||| || || || || | || | ||| || | Sbjct 676963 CTCGCCGTAGACGTCGGCAAGACCAGGGGCCTCGTTGGGGCAGAACAGAGTCCAGTCACC 676904 Query 69585 ATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCT 69644 | ||| ||| || ||||| || ||||| || |||| ||||| | |||||||| | Sbjct 676903 GTTGGCCTCAACACGCTTCATGAACAGATCAGGGGTCCACAGAGCGAAGAAGAGATCACG 676844 Query 69645 GGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGA 69704 | | | || || || || || || || || | ||||| | | || | Sbjct 676843 AGCACGAACCTCCTCCTTACCGTGGTTCTTGCGCAGGTCCAAGAACTCGAACACGTCGGC 676784 Query 69705 ATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTAT 69764 ||||| || || || || || || | | | || || || || || || ||||| || | Sbjct 676783 GTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGAC 676724 Query 69765 GTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATT 69824 || | || ||||| || | || | |||||| |||| ||||| || || ||| || Sbjct 676723 ATAGCGAGCGGTGTTGTTGAACACACGCAGCATAGGAACGATACCGTTGGAGGAACCGTT 676664 Query 69825 TGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCC 69884 || || ||| || || | || || || | | || || || || Sbjct 676663 GGTACCGCCAATGTAGGAGCCAGTAGCACGGATGCGGTGGACGTTCAAGCCAATACCACC 676604 Query 69885 TGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATC 69944 || | || || || | ||||| |||| |||||||| |||||||| ||||| || Sbjct 676603 AGCGGTCTTGGAAATCATGGCACAGGTCTTCAGAGTGTCATAGATACCCTCAATGCTGTC 676544 Query 69945 ATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAA 70004 || |||| | || || || || || || ||| || ||| || || || || Sbjct 676543 CTCCTTCATATCAACCAGGAAGCAAGAAGCCAATTGGGGAGAAGGAGTACCGGCGTTGAA 676484 Query 70005 TAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGC 70064 | ||| || || ||||| ||||| | || | || | || | ||| || ||||| || Sbjct 676483 CAGTGTGGGGGAAGCGTGGGTGAAGAACTTCTGGGACATCAAGTGGTAGGTCTCAATGGC 676424 Query 70065 TGATTCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTC 70123 ||| |||||| ||| | || || || | || ||||||||||||| ||||| || | Sbjct 676423 CTTTTCGATATCCTCACCG-TGGATACCAACTGCAACACGCATCAACAGGTGCTGGGGAC 676365 Query 70124 GTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAA 70183 | || | ||| || || | ||||||||| || || || || || |||| Sbjct 676364 GCTCAGCAACCTTACCGTTGATGCGGAGCAGGTATGAACGCTCGAGGGTCTTGAAACCAA 676305 Query 70184 AATAGTTGTATGAAAAGTCTCTTTCGTAAA 70213 | ||||||| |||||| | ||||||| Sbjct 676304 AGAAGTTGTAGTTAAAGTCACGGTCGTAAA 676275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686906842309920