Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq1 114 1e-20
seq10 84.2 2e-11
>seq1
Length=4666273
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || |||| |||| |||||||| | ||||| || || || || |||||||||
Sbjct 4323400 CCACCACGCAGACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAG 4323341
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| |||| |||| || ||||| ||||| ||| | ||||||||||| || ||||| ||
Sbjct 4323340 AGAGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 4323281
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| |||||| || || ||||||| |||| | || | ||||| | | |||||
Sbjct 4323280 ATACCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGAAGACTCAACC 4323221
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| ||||| || | ||||| || || || || || ||||| ||||||
Sbjct 4323220 TCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATA 4323173
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || |||| |||| |||||||| | ||||| || || || || |||||||||
Sbjct 4323628 CCACCACGCAGACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAG 4323569
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| |||| |||| || ||||| ||||| ||| | ||||||||||| || ||||| ||
Sbjct 4323568 AGAGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 4323509
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| |||||| || || ||||||| | || | | | || | ||| || | || || ||
Sbjct 4323508 ATACCCTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATAGTATCAGAGGACTCCACC 4323449
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| || || |||| || || || || || || || ||||| ||||||
Sbjct 4323448 TCCAGGGTAATAGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCATA 4323401
>seq10
Length=1051362
Score = 84.2 bits (92), Expect = 2e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 27060 TTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATG 27119
|| || || ||||||||||||| |||| | || |||||||| || |||||| | ||
Sbjct 358833 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 358774
Query 27120 AGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCT 27179
||||| || |||||||| || | ||||| || || ||||||| | || | | | ||
Sbjct 358773 AGACGTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 358714
Query 27180 ACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAA 27238
| ||||| | | || || || || || || | || |||||||| || || || ||
Sbjct 358713 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 358655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424933219213536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |