Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq12 95.1 4e-14 seq2 95.1 4e-14 >seq12 Length=996256 Score = 95.1 bits (104), Expect = 4e-14 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040 || ||| | ||||||||||||||| |||||||| ||||| || || ||| ||| ||| Sbjct 676688 CCTATGCTGCGTGTGTTCAACAACACCGCTCGCTATGTCGACCAGGGTGGCAACAAGCGC 676747 Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGAC 255082 || || || || |||||||||| ||||| |||||||||||| Sbjct 676748 CCCGGTGCCTTTGCCATCTACCTTGAGCCCTGGCACGCCGAC 676789 >seq2 Length=2385438 Score = 95.1 bits (104), Expect = 4e-14 Identities = 125/172 (73%), Gaps = 1/172 (1%) Strand=Plus/Plus Query 443696 CAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAG 443755 || ||||| | |||| || || || ||||| | || || || | || || ||| Sbjct 270307 CACCTTCGCCCAGCGTCTGGTTGCCTTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGCTC 270366 Query 443756 CTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTA 443815 |||| ||||| ||||||||| |||| |||||||| || |||| |||||||| || | Sbjct 270367 CTTT-GCCTCTATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGTCTGACTTTCTCCA 270425 Query 443816 ACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867 |||| || ||| ||| || |||||| | || ||||||||||||||| || Sbjct 270426 ACGAGCTTATCTCTCGTGATGAGGGTCTCCACACCGACTTCGCCTGTCTGCT 270477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588331360073460