Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq12 246 4e-60
seq2 111 2e-19
>seq12
Length=996256
Score = 246 bits (272), Expect = 4e-60
Identities = 570/850 (67%), Gaps = 13/850 (2%)
Strand=Plus/Minus
Query 111242 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAT 111301
|| ||||| ||||||||||| |||||| | ||||||| | || || || ||
Sbjct 677211 GAGGCCAAGTTGCAAACAGCGACCTCATCAGGGGCACTGTACTCAATGATCTCAGTGCAA 677152
Query 111302 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCC 111361
| |||||| || ||| || |||| ||||| ||||| ||||| |||||| ||||||
Sbjct 677151 AGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCC 677092
Query 111362 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-C 111420
||||| |||||| |||| | || ||||| ||||| | | ||| || || | ||| | |
Sbjct 677091 TTGTAAAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATGGCATACCACAGC 677032
Query 111421 ATCGGCGGCTGGTACAATGGCGTT-GGCC-CGTCCCTCCGCCTCGTACTTTGTGTAGAGG 111478
|| | | || | || | | | |||| || |||||| ||||||||| ||| ||
Sbjct 677031 TTCTGAGCCTTG---AAGGTCTTACGGCCACGGCCCTCCTTCTCGTACTTCTCGTACAGA 676975
Query 111479 GCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGA 111538
|| ||||||||||| || |||||| ||||| || |||| || || ||||| |||
Sbjct 676974 GCATCAAACTCCTCGCCGTAGACGTCGGCAAGACCAGGGGCCTCGTTGGGGCAGAACAGA 676915
Query 111539 GACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAA 111598
| ||| | ||| ||||||| ||||||||||| || || || ||||||| | |
Sbjct 676914 GTCCAGTCACCGTTGGCCTCAACACGCTTCATGAACAGATCAGGGGTCCACAGAGCGAAG 676855
Query 111599 AAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCC 111658
|||||||| | | ||| |||| || | ||| ||||| || | || | ||||||
Sbjct 676854 AAGAGATCACGAGCACGAACCTCCTCCTTACCGTGGTTCTTGCGCAGGTCCAAGAACTCG 676795
Query 111659 ATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCC 111714
| | || |||||||| |||||||| |||| || | | || | | | | ||
Sbjct 676794 AACACGTCGGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTG-CC 676736
Query 111715 AGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATC 111774
| | || | |||||||| || ||| ||| || || || ||||| |||| ||||| |
Sbjct 676735 ACCCTGGTCGACATAGCGAGCGGTGTTGTTGAACACACGCAGCATAGGAACGATACCGTT 676676
Query 111775 TGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCAT 111834
|| ||| || || || | ||| || | | || | | |||| || ||
Sbjct 676675 GGAGGAACCGTTGGTACCGCCAATGTAGGAGCCAGTAGCACGGATGCGGTGGACGTTCAA 676616
Query 111835 CCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACC 111894
|||||||| ||||| ||| || || ||||| | | ||||| ||||||||||
Sbjct 676615 GCCAATACCACCAGCGGTCTTGGAAATCATGGCACAGGTCTTCAGAGTGTCATAGATACC 676556
Query 111895 GTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGT 111954
| || ||||||||| | | | ||||||||| | || || || || ||
Sbjct 676555 CTCAATGCTGTCCTCCTTCATATCAACCAGGAAGCAAGAAGCCAATTGGGGAGAAGGAGT 676496
Query 111955 ACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGT 112013
||| || ||||| || || || | ||||| |||| | || | ||||||||| || ||
Sbjct 676495 ACCGGCGTTGAACAGTGTGGGGGAAGCGTGGGTGAAGA-ACTTCTGGGACATCAAGTGGT 676437
Query 112014 ATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACA 112073
| ||||| | | | || || || || |||||||| || | ||| || ||||| ||||
Sbjct 676436 AGGTCTCAATGGCCTTTTCGATATCCTCACCGTGGATACCAACTGCAACACGCATCAACA 676377
Query 112074 TGTACTGTGG 112083
|| ||| ||
Sbjct 676376 GGTGCTGGGG 676367
>seq2
Length=2385438
Score = 111 bits (122), Expect = 2e-19
Identities = 114/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729
||||||||||||||| || || ||||| || || ||||| ||||| ||||| |||||
Sbjct 270457 GTGGAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTCAGACCAGGCATCAGACC 270398
Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789
|||||||||| ||| | |||| | || || || ||||||||||||||||| ||
Sbjct 270397 ACGCTTCTTCAGCCAGAAGATAGAGGCAAAGGAGCCAGAGAAGAAGATACCCTCAACGGC 270338
Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818
||||| |||| || || | ||||||||
Sbjct 270337 GGCAAAGGCAACCAGACGCTGGGCGAAGG 270309
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628030210108800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |