Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq12 246 4e-60 seq2 111 2e-19 >seq12 Length=996256 Score = 246 bits (272), Expect = 4e-60 Identities = 570/850 (67%), Gaps = 13/850 (2%) Strand=Plus/Minus Query 111242 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAT 111301 || ||||| ||||||||||| |||||| | ||||||| | || || || || Sbjct 677211 GAGGCCAAGTTGCAAACAGCGACCTCATCAGGGGCACTGTACTCAATGATCTCAGTGCAA 677152 Query 111302 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCC 111361 | |||||| || ||| || |||| ||||| ||||| ||||| |||||| |||||| Sbjct 677151 AGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCC 677092 Query 111362 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-C 111420 ||||| |||||| |||| | || ||||| ||||| | | ||| || || | ||| | | Sbjct 677091 TTGTAAAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATGGCATACCACAGC 677032 Query 111421 ATCGGCGGCTGGTACAATGGCGTT-GGCC-CGTCCCTCCGCCTCGTACTTTGTGTAGAGG 111478 || | | || | || | | | |||| || |||||| ||||||||| ||| || Sbjct 677031 TTCTGAGCCTTG---AAGGTCTTACGGCCACGGCCCTCCTTCTCGTACTTCTCGTACAGA 676975 Query 111479 GCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGA 111538 || ||||||||||| || |||||| ||||| || |||| || || ||||| ||| Sbjct 676974 GCATCAAACTCCTCGCCGTAGACGTCGGCAAGACCAGGGGCCTCGTTGGGGCAGAACAGA 676915 Query 111539 GACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAA 111598 | ||| | ||| ||||||| ||||||||||| || || || ||||||| | | Sbjct 676914 GTCCAGTCACCGTTGGCCTCAACACGCTTCATGAACAGATCAGGGGTCCACAGAGCGAAG 676855 Query 111599 AAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCC 111658 |||||||| | | ||| |||| || | ||| ||||| || | || | |||||| Sbjct 676854 AAGAGATCACGAGCACGAACCTCCTCCTTACCGTGGTTCTTGCGCAGGTCCAAGAACTCG 676795 Query 111659 ATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCC 111714 | | || |||||||| |||||||| |||| || | | || | | | | || Sbjct 676794 AACACGTCGGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTG-CC 676736 Query 111715 AGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATC 111774 | | || | |||||||| || ||| ||| || || || ||||| |||| ||||| | Sbjct 676735 ACCCTGGTCGACATAGCGAGCGGTGTTGTTGAACACACGCAGCATAGGAACGATACCGTT 676676 Query 111775 TGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCAT 111834 || ||| || || || | ||| || | | || | | |||| || || Sbjct 676675 GGAGGAACCGTTGGTACCGCCAATGTAGGAGCCAGTAGCACGGATGCGGTGGACGTTCAA 676616 Query 111835 CCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACC 111894 |||||||| ||||| ||| || || ||||| | | ||||| |||||||||| Sbjct 676615 GCCAATACCACCAGCGGTCTTGGAAATCATGGCACAGGTCTTCAGAGTGTCATAGATACC 676556 Query 111895 GTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGT 111954 | || ||||||||| | | | ||||||||| | || || || || || Sbjct 676555 CTCAATGCTGTCCTCCTTCATATCAACCAGGAAGCAAGAAGCCAATTGGGGAGAAGGAGT 676496 Query 111955 ACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGT 112013 ||| || ||||| || || || | ||||| |||| | || | ||||||||| || || Sbjct 676495 ACCGGCGTTGAACAGTGTGGGGGAAGCGTGGGTGAAGA-ACTTCTGGGACATCAAGTGGT 676437 Query 112014 ATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACA 112073 | ||||| | | | || || || || |||||||| || | ||| || ||||| |||| Sbjct 676436 AGGTCTCAATGGCCTTTTCGATATCCTCACCGTGGATACCAACTGCAACACGCATCAACA 676377 Query 112074 TGTACTGTGG 112083 || ||| || Sbjct 676376 GGTGCTGGGG 676367 >seq2 Length=2385438 Score = 111 bits (122), Expect = 2e-19 Identities = 114/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 ||||||||||||||| || || ||||| || || ||||| ||||| ||||| ||||| Sbjct 270457 GTGGAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTCAGACCAGGCATCAGACC 270398 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||||| ||| | |||| | || || || ||||||||||||||||| || Sbjct 270397 ACGCTTCTTCAGCCAGAAGATAGAGGCAAAGGAGCCAGAGAAGAAGATACCCTCAACGGC 270338 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818 ||||| |||| || || | |||||||| Sbjct 270337 GGCAAAGGCAACCAGACGCTGGGCGAAGG 270309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628030210108800