Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq12 197 2e-45 seq2 120 4e-22 >seq12 Length=996256 Score = 197 bits (218), Expect = 2e-45 Identities = 563/855 (66%), Gaps = 23/855 (3%) Strand=Plus/Minus Query 118716 GACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCAC 118775 || |||| || || |||| | |||||| || ||||||| || || || ||||| Sbjct 677211 GAGGCCAAGTTGCAAACAGCGACCTCATCAGGGGCACTGTACTCAATGATCTCAGTGCAA 677152 Query 118776 AAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 118835 | ||| || || |||||| |||| |||||| || || ||| ||| || |||||| Sbjct 677151 AGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCC 677092 Query 118836 TTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-C 118894 |||||||||||| | || | || ||||| || || | || ||| || || | ||| | | Sbjct 677091 TTGTAAAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATGGCATACCACAGC 677032 Query 118895 ATCGGCAGCTGGCACAGTGGCGTT---GGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAG 118951 || | || | | || || | | || ||||| | ||||||||| ||| || Sbjct 677031 TTCTGAGCCTTGAA----GGTCTTACGGCCACGGCCCTCCTTCTCGTACTTCTCGTACAG 676976 Query 118952 GGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAG 119011 || |||||||| || || | | || | || || || |||| | |||||||| || Sbjct 676975 AGCATCAAACTCCTCGCCGTAGACGTCGGCAAGACCAGGGGCCTCGTTGGGGCAGAACAG 676916 Query 119012 AGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGA 119071 || ||| | ||| ||||||| ||||||||||| || || ||| |||| || || | Sbjct 676915 AGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAACAGATCAGGGGTCCACAGAGCGAA 676856 Query 119072 GAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTC 119131 ||||||||| ||| ||| | || || | || || || |||| ||||| || || Sbjct 676855 GAAGAGATCACGAGCACGAACCTCCTCCTTACCGTGGTTCTTGCGCAGGTCCAAGAACTC 676796 Query 119132 CATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTACGACG 119185 | | || |||||||| || || ||||| | || | | || | ||| | | Sbjct 676795 GAACACGTCGGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTT--GTTG 676738 Query 119186 ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACC 119245 ||| |||||| ||||| | || ||| ||| || ||||| ||||| |||| |||||| Sbjct 676737 -CCACCCTGGTCGACATAGCGAGCGGTGTTGTTGAACACACGCAGCATAGGAACGATACC 676679 Query 119246 ATCGGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCGTGGATG 119303 | ||| || || || || | || || ||| | | | || | || ||||| | Sbjct 676678 GTTGGAGGAACCGTTGGTACCGCCAATGTAGGAGCC--AGTAGCACGGATGCGGTGGACG 676621 Query 119304 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 119363 | || |||||||| || || ||| || || || || | | ||| || | ||| Sbjct 676620 TTCAAGCCAATACCACCAGCGGTCTTGGAAATCATGGCACAGGTCTTCAGAGTGTCATAG 676561 Query 119364 ATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG 119423 || || || || ||| |||| | | | |||||||| | || ||| || Sbjct 676560 ATACCCTCAATGCTGTCCTCCTTCATATCAACCAGGAAGCAAGAAGCCAATTGGGGAGAA 676501 Query 119424 GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTT 119482 || ||||| |||||||| || || || | |||||| |||| | || | ||||||||| Sbjct 676500 GGAGTACCGGCGTTGAACAGTGTGGGGGAAGCGTGGGTGAAGA-ACTTCTGGGACATCAA 676442 Query 119483 GTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCAT 119542 || ||||||||| | | | || || || ||||| ||||| | | || ||||| Sbjct 676441 GTGGTAGGTCTCAATGGCCTTTTCGATATCCTCACCGTGGATACCAACTGCAACACGCAT 676382 Query 119543 AAACATGTATTGGGG 119557 |||| || ||||| Sbjct 676381 CAACAGGTGCTGGGG 676367 >seq2 Length=2385438 Score = 120 bits (132), Expect = 4e-22 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 |||||||||||| ||||| ||||| || || || ||||| |||||| ||||| ||||| Sbjct 270457 GTGGAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTCAGACCAGGCATCAGACC 270398 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 |||||||||| |||||| || | ||| ||||||||||||||||| ||||| || Sbjct 270397 ACGCTTCTTCAGCCAGAAGATAGAGGCAAAGGAGCCAGAGAAGAAGATACCCTCAACGGC 270338 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 || || |||| ||||||| || |||| Sbjct 270337 GGCAAAGGCAACCAGACGCTGGGCGAAGG 270309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433437459680