Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq12 197 2e-45
seq2 120 4e-22
>seq12
Length=996256
Score = 197 bits (218), Expect = 2e-45
Identities = 563/855 (66%), Gaps = 23/855 (3%)
Strand=Plus/Minus
Query 118716 GACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCAC 118775
|| |||| || || |||| | |||||| || ||||||| || || || |||||
Sbjct 677211 GAGGCCAAGTTGCAAACAGCGACCTCATCAGGGGCACTGTACTCAATGATCTCAGTGCAA 677152
Query 118776 AAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 118835
| ||| || || |||||| |||| |||||| || || ||| ||| || ||||||
Sbjct 677151 AGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCC 677092
Query 118836 TTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-C 118894
|||||||||||| | || | || ||||| || || | || ||| || || | ||| | |
Sbjct 677091 TTGTAAAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATGGCATACCACAGC 677032
Query 118895 ATCGGCAGCTGGCACAGTGGCGTT---GGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAG 118951
|| | || | | || || | | || ||||| | ||||||||| ||| ||
Sbjct 677031 TTCTGAGCCTTGAA----GGTCTTACGGCCACGGCCCTCCTTCTCGTACTTCTCGTACAG 676976
Query 118952 GGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAG 119011
|| |||||||| || || | | || | || || || |||| | |||||||| ||
Sbjct 676975 AGCATCAAACTCCTCGCCGTAGACGTCGGCAAGACCAGGGGCCTCGTTGGGGCAGAACAG 676916
Query 119012 AGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGA 119071
|| ||| | ||| ||||||| ||||||||||| || || ||| |||| || || |
Sbjct 676915 AGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAACAGATCAGGGGTCCACAGAGCGAA 676856
Query 119072 GAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTC 119131
||||||||| ||| ||| | || || | || || || |||| ||||| || ||
Sbjct 676855 GAAGAGATCACGAGCACGAACCTCCTCCTTACCGTGGTTCTTGCGCAGGTCCAAGAACTC 676796
Query 119132 CATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTACGACG 119185
| | || |||||||| || || ||||| | || | | || | ||| | |
Sbjct 676795 GAACACGTCGGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTT--GTTG 676738
Query 119186 ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACC 119245
||| |||||| ||||| | || ||| ||| || ||||| ||||| |||| ||||||
Sbjct 676737 -CCACCCTGGTCGACATAGCGAGCGGTGTTGTTGAACACACGCAGCATAGGAACGATACC 676679
Query 119246 ATCGGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCGTGGATG 119303
| ||| || || || || | || || ||| | | | || | || ||||| |
Sbjct 676678 GTTGGAGGAACCGTTGGTACCGCCAATGTAGGAGCC--AGTAGCACGGATGCGGTGGACG 676621
Query 119304 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 119363
| || |||||||| || || ||| || || || || | | ||| || | |||
Sbjct 676620 TTCAAGCCAATACCACCAGCGGTCTTGGAAATCATGGCACAGGTCTTCAGAGTGTCATAG 676561
Query 119364 ATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG 119423
|| || || || ||| |||| | | | |||||||| | || ||| ||
Sbjct 676560 ATACCCTCAATGCTGTCCTCCTTCATATCAACCAGGAAGCAAGAAGCCAATTGGGGAGAA 676501
Query 119424 GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTT 119482
|| ||||| |||||||| || || || | |||||| |||| | || | |||||||||
Sbjct 676500 GGAGTACCGGCGTTGAACAGTGTGGGGGAAGCGTGGGTGAAGA-ACTTCTGGGACATCAA 676442
Query 119483 GTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCAT 119542
|| ||||||||| | | | || || || ||||| ||||| | | || |||||
Sbjct 676441 GTGGTAGGTCTCAATGGCCTTTTCGATATCCTCACCGTGGATACCAACTGCAACACGCAT 676382
Query 119543 AAACATGTATTGGGG 119557
|||| || |||||
Sbjct 676381 CAACAGGTGCTGGGG 676367
>seq2
Length=2385438
Score = 120 bits (132), Expect = 4e-22
Identities = 116/149 (78%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086
|||||||||||| ||||| ||||| || || || ||||| |||||| ||||| |||||
Sbjct 270457 GTGGAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTCAGACCAGGCATCAGACC 270398
Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146
|||||||||| |||||| || | ||| ||||||||||||||||| ||||| ||
Sbjct 270397 ACGCTTCTTCAGCCAGAAGATAGAGGCAAAGGAGCCAGAGAAGAAGATACCCTCAACGGC 270338
Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGG 130175
|| || |||| ||||||| || ||||
Sbjct 270337 GGCAAAGGCAACCAGACGCTGGGCGAAGG 270309
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618433437459680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |