Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq12 241 2e-58 seq2 134 2e-26 >seq12 Length=996256 Score = 241 bits (266), Expect = 2e-58 Identities = 577/863 (67%), Gaps = 11/863 (1%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| || |||| ||||| || || | ||||| || || || || || || | | Sbjct 676367 CCCCAGCACCTGTTGATGCGTGTTGCAGTTGGTATCCACGGTGAGGATATCGAAAAGGCC 676426 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| ||| || ||||||||| | || | |||| ||||| | || || || || Sbjct 676427 ATTGAGACCTACCACTTGATGTCCCAGAAGT-TCTTCACCCACGCTTCCCCCACACTGTT 676485 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| || ||||| || |||||| || | ||||||||| | | | |||||||| Sbjct 676486 CAACGCCGGTACTCCTTCTCCCCAATTGGCTTCTTGCTTCCTGGTTGATATGAAGGAGGA 676545 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 | || | |||||||||| ||||| | | ||||| || || ||| ||||| Sbjct 676546 CAGCATTGAGGGTATCTATGACACTCTGAAGACCTGTGCCATGATTTCCAAGACCGCTGG 676605 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 |||||||| || || |||| | | || | | || ||| | || || || Sbjct 676606 TGGTATTGGCTTGAACGTCCACCGCATCCGTGCTACTGGCTCCTACATTGGCGGTACCAA 676665 Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580 ||| || | ||||| |||| ||||| || || || ||| ||| || |||||||| Sbjct 676666 CGGTTCCTCCAACGGTATCGTTCCTATGCTGCGTGTGTTCAACAACACCGCTCGCTATGT 676725 Query 104581 AAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACG 104636 | || | ||| | | | | || | | || |||| |||||||| ||||||| Sbjct 676726 CGACCAGGGTGG-CAACAAGCGCCCCGGTGCCTTTGCCATCTACCTTGAGCCCTGGCACG 676784 Query 104637 CGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC- 104695 | || | | |||||| | || |||| ||||| ||| | ||||||| || ||| Sbjct 676785 CCGACGTGTTCGAGTTCTTGGACCTGCGCAAGAACCACGGTAAGGAGGAGGTTCG-TGCT 676843 Query 104696 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 104755 || |||||||||| |||||| |||| || ||||| ||||||||| | ||||||| | Sbjct 676844 CGTGATCTCTTCTTCGCTCTGTGGACCCCTGATCTGTTCATGAAGCGTGTTGAGGCCAAC 676903 Query 104756 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAG 104815 || | ||| |||| || || || || |||| |||||||| |||| | | || ||| Sbjct 676904 GGTGACTGGACTCTGTTCTGCCCCAACGAGGCCCCTGGTCTTGCCGACGTCTACGGCGAG 676963 Query 104816 GAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCA 104875 |||||||| || || ||| ||||||||| | || || || | | ||| | | | Sbjct 676964 GAGTTTGATGCTCTGTACGAGAAGTACGAGAAGGAGGGCCGTGGCCGTAAGAC-CTTCAA 677022 Query 104876 GCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACAT 104934 | | || | ||||| | || || ||| || |||| || |||||||||| || | ||| Sbjct 677023 GGCTCAGAAGCTGTGGTATGCCATCCTCGAGGCTCAGACTGAGACTGGTAACCCCTTCAT 677082 Query 104935 GCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAG 104994 ||||||||| || || || |||| ||||| || || ||||| ||||| || || Sbjct 677083 GCTTTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTGGGTACCATTCGCAG 677142 Query 104995 TTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAA 105054 ||||| || || || || ||| | || | | | | |||||| ||||| || || Sbjct 677143 CTCCAACCTTTGCACTGAGATCATTGAGTACAGTGCCCCTGATGAGGTCGCTGTTTGCAA 677202 Query 105055 CCTCGCATCAATCGCTCTCCCCA 105077 | | || || | ||||| |||| Sbjct 677203 CTTGGCCTCCCTGGCTCTGCCCA 677225 >seq2 Length=2385438 Score = 134 bits (148), Expect = 2e-26 Identities = 119/149 (80%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855 |||| || |||| || | || ||||| ||||||||||||||||||||||| |||| Sbjct 270309 CCTTCGCCCAGCGTCTGGTTGCCTTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGCTCCT 270368 Query 94856 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915 | | |||| | ||||| |||||||| ||||| ||||| ||||| |||||||||| Sbjct 270369 TTGCCTCTATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGTCTGACTTTCTCCAACG 270428 Query 94916 AGCTTATCTCTCGTGACGAGGGACTCCAC 94944 |||||||||||||||| ||||| |||||| Sbjct 270429 AGCTTATCTCTCGTGATGAGGGTCTCCAC 270457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259137706720