Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq12 241 2e-58
seq2 134 2e-26
>seq12
Length=996256
Score = 241 bits (266), Expect = 2e-58
Identities = 577/863 (67%), Gaps = 11/863 (1%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| || |||| ||||| || || | ||||| || || || || || || | |
Sbjct 676367 CCCCAGCACCTGTTGATGCGTGTTGCAGTTGGTATCCACGGTGAGGATATCGAAAAGGCC 676426
Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340
| ||||| ||| || ||||||||| | || | |||| ||||| | || || || ||
Sbjct 676427 ATTGAGACCTACCACTTGATGTCCCAGAAGT-TCTTCACCCACGCTTCCCCCACACTGTT 676485
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
||| || ||||| || |||||| || | ||||||||| | | | ||||||||
Sbjct 676486 CAACGCCGGTACTCCTTCTCCCCAATTGGCTTCTTGCTTCCTGGTTGATATGAAGGAGGA 676545
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
| || | |||||||||| ||||| | | ||||| || || ||| |||||
Sbjct 676546 CAGCATTGAGGGTATCTATGACACTCTGAAGACCTGTGCCATGATTTCCAAGACCGCTGG 676605
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520
|||||||| || || |||| | | || | | || ||| | || || ||
Sbjct 676606 TGGTATTGGCTTGAACGTCCACCGCATCCGTGCTACTGGCTCCTACATTGGCGGTACCAA 676665
Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580
||| || | ||||| |||| ||||| || || || ||| ||| || ||||||||
Sbjct 676666 CGGTTCCTCCAACGGTATCGTTCCTATGCTGCGTGTGTTCAACAACACCGCTCGCTATGT 676725
Query 104581 AAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACG 104636
| || | ||| | | | | || | | || |||| |||||||| |||||||
Sbjct 676726 CGACCAGGGTGG-CAACAAGCGCCCCGGTGCCTTTGCCATCTACCTTGAGCCCTGGCACG 676784
Query 104637 CGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC- 104695
| || | | |||||| | || |||| ||||| ||| | ||||||| || |||
Sbjct 676785 CCGACGTGTTCGAGTTCTTGGACCTGCGCAAGAACCACGGTAAGGAGGAGGTTCG-TGCT 676843
Query 104696 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 104755
|| |||||||||| |||||| |||| || ||||| ||||||||| | ||||||| |
Sbjct 676844 CGTGATCTCTTCTTCGCTCTGTGGACCCCTGATCTGTTCATGAAGCGTGTTGAGGCCAAC 676903
Query 104756 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAG 104815
|| | ||| |||| || || || || |||| |||||||| |||| | | || |||
Sbjct 676904 GGTGACTGGACTCTGTTCTGCCCCAACGAGGCCCCTGGTCTTGCCGACGTCTACGGCGAG 676963
Query 104816 GAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCA 104875
|||||||| || || ||| ||||||||| | || || || | | ||| | | |
Sbjct 676964 GAGTTTGATGCTCTGTACGAGAAGTACGAGAAGGAGGGCCGTGGCCGTAAGAC-CTTCAA 677022
Query 104876 GCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACAT 104934
| | || | ||||| | || || ||| || |||| || |||||||||| || | |||
Sbjct 677023 GGCTCAGAAGCTGTGGTATGCCATCCTCGAGGCTCAGACTGAGACTGGTAACCCCTTCAT 677082
Query 104935 GCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAG 104994
||||||||| || || || |||| ||||| || || ||||| ||||| || ||
Sbjct 677083 GCTTTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTGGGTACCATTCGCAG 677142
Query 104995 TTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAA 105054
||||| || || || || ||| | || | | | | |||||| ||||| || ||
Sbjct 677143 CTCCAACCTTTGCACTGAGATCATTGAGTACAGTGCCCCTGATGAGGTCGCTGTTTGCAA 677202
Query 105055 CCTCGCATCAATCGCTCTCCCCA 105077
| | || || | ||||| ||||
Sbjct 677203 CTTGGCCTCCCTGGCTCTGCCCA 677225
>seq2
Length=2385438
Score = 134 bits (148), Expect = 2e-26
Identities = 119/149 (80%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855
|||| || |||| || | || ||||| ||||||||||||||||||||||| ||||
Sbjct 270309 CCTTCGCCCAGCGTCTGGTTGCCTTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGCTCCT 270368
Query 94856 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915
| | |||| | ||||| |||||||| ||||| ||||| ||||| ||||||||||
Sbjct 270369 TTGCCTCTATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGTCTGACTTTCTCCAACG 270428
Query 94916 AGCTTATCTCTCGTGACGAGGGACTCCAC 94944
|||||||||||||||| ||||| ||||||
Sbjct 270429 AGCTTATCTCTCGTGATGAGGGTCTCCAC 270457
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583259137706720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |