Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq12 241 1e-58
seq3 95.1 1e-14
>seq12
Length=996256
Score = 241 bits (266), Expect = 1e-58
Identities = 516/765 (67%), Gaps = 12/765 (2%)
Strand=Plus/Plus
Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGA---CTACACGCGT 53236
|| ||| | || || ||||| || || | |||||||||||||| || | | | |
Sbjct 676367 CCCCAGCACCTGTTGATGCGTGTTGCAGTTGGTATCCACGGTGAGGATATCGAAAAG--- 676423
Query 53237 GTCCGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTG 53296
| | |||||| ||| |||| ||| ||| |||| ||| || ||||| | || || |||
Sbjct 676424 GCCATTGAGACCTACCACTTGATGTCCCAGAAGTTCTTCACCCACGCTTCCCCCACACTG 676483
Query 53297 TTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGAT 53356
|||||||| ||||| | || || || | ||||||||||| | ||||||||
Sbjct 676484 TTCAACGCCGGTACTCCTTCTCCCCAATTGGCTTCTTGCTTCCTGGTTGATATGAAGGAG 676543
Query 53357 GACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCG 53416
||| || || || ||||| || || || ||| |||||| || |||||| |
Sbjct 676544 GACAGCATTGAGGGTATCTATGACACTCTGAAGACCTGTGCCATGATTTCCAAGACCGCT 676603
Query 53417 GGTGGTATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGA 53474
|||||||| || | || || | || ||||||| | ||| | || || |
Sbjct 676604 GGTGGTATTGGCTTGAACG--TCCACCGCATCCGTGCTACTGGCTCCTACATTGGCGGTA 676661
Query 53475 CGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGT 53534
| ||||| | || | || ||||| |||||||| || || ||||||||||| || || |
Sbjct 676662 CCAACGGTTCCTCCAACGGTATCGTTCCTATGCTGCGTGTGTTCAACAACACCGCTCGCT 676721
Query 53535 ACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGC 53594
| ||| |||||||||| |||||| || | || ||||||||||| ||||| ||||
Sbjct 676722 ATGTCGACCAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCCATCTACCTTGAGCCCTGGC 676781
Query 53595 ACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCT 53654
|||||||| | | ||||| | || ||||| ||| || ||| | || ||| | || |
Sbjct 676782 ACGCCGACGTGTTCGAGTTCTTGGACCTGCGCAAGAACCACGGTAAGGAGGAGGTTCG-T 676840
Query 53655 GC-CGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAG 53713
|| ||||| || || |||||||||| || || || |||||| | || |||
Sbjct 676841 GCTCGTGATCTCTTCTTCGCTCTGTGGACCCCTGATCTGTTCATGAAGCGTGTTGAGGCC 676900
Query 53714 GACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGT 53773
||| || ||| ||| | ||||| |||||| ||| || || | ||||||||
Sbjct 676901 AACGGTGACTGGACTCTGTTCTGCCCCAACGAGGCCCCTGGTCTTGCCGACGTCTACGGC 676960
Query 53774 GAGGAGTTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTC 53833
||||||||| | | |||| || ||||| ||||||| | |||| ||
Sbjct 676961 GAGGAGTTTGATGCTCTGTACGAGAAGTACGAGAAGGAGGGCCGTGGCCGTAAGACCTTC 677020
Query 53834 AAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTAC 53893
||||| | || | ||| |||| |||||| || ||| ||||| || | || | |
Sbjct 677021 AAGGCTCAGAAGCTGTGGTATGCCATCCTCGAGGCTCAGACTGAGACTGGTAACCCCTTC 677080
Query 53894 ATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938
||| ||||||||| | |||| ||||||||||||||||||
Sbjct 677081 ATGCTTTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAAC 677125
Score = 96.9 bits (106), Expect = 4e-15
Identities = 104/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCT 55846
||||| |||||||| ||||| || |||||||||||||| ||||| |||| || | |||
Sbjct 677957 GCTGACCGTGGTGCCTACATTGATCAGTCCCAGTCTCTCAACATTCACATGAAGGAGCCT 678016
Query 55847 TCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906
| ||| ||| | | | |||||||| || ||||||| ||| || ||||| ||
Sbjct 678017 ACCATGGGTAAGATCACCAGTATGCACTTCGCTGGCTGGAAGATGGGTCTGAAGACTGGC 678076
Query 55907 ATGTACTATCTGCGGACC 55924
|||||||| ||||| |||
Sbjct 678077 ATGTACTACCTGCGTACC 678094
>seq3
Length=2224433
Score = 95.1 bits (104), Expect = 1e-14
Identities = 293/446 (66%), Gaps = 8/446 (2%)
Strand=Plus/Minus
Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211
|||||||| ||||| || ||||| || ||||||| ||| || || || || | |||| |
Sbjct 241695 CCAGTTCCAATACCATCGGCACCGTTGATCAGAACCATGGGGACCACGGGCATGTAGGTC 241636
Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCA-CTCGG 117270
|| || || | || | || || || | ||| | | || | | |||| || ||
Sbjct 241635 TCGGGTTCGATCTTCTTGCCATCATCTTCGTTGTATGTCAACAAAGGCTCGTCAGCTTGG 241576
Query 117271 ATCGAATATGTTCTTGGTCC--ACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCA 117328
| ||| | || | || | |||||| || |||||| |||||||||||| ||| |||
Sbjct 241575 -TGGAAAACCTT--TCGTGCGAACGGTGACAGCCGAGTGTAAATGTAACGAGCGCTGGCA 241519
Query 117329 GCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGG 117388
||| | ||||| |||||| |||| || | ||||| ||||| | ||| | |
Sbjct 241518 CAATCGCTACCACCTTGAAGACGACTACCAAAGTTACCACTGGGCTCGAGACAGTTGATG 241459
Query 117389 TTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCA 117448
||||| | || ||||| | || |||| ||||| || || || | |||
Sbjct 241458 TTGTTTGACCCAACAAAAGTCTGCGCCAGACCAACAATTGTCTGCTGAAGCGAGGTTTCA 241399
Query 117449 CCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCT 117508
|| || || || || || | | | || || || |||| | | |||||||| ||
Sbjct 241398 CCGTGCTGGTAGGCAGTGAGTCCGGAGACATAACCTGCCAATTCCACAACCTTCATATCC 241339
Query 117509 GACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCA 117568
| |||| || ||||| ||||| |||| || || || |||| ||||| | |||
Sbjct 241338 TTCTTCAGATTGCGCTTGAAGCAGGAGTAAAGGACTTTACGTTGACCGGGCTTAAAGCCA 241279
Query 117569 TCCGCCACGTGAGGG-ATCGAACGCT 117593
|| | ||| ||||| || |||||||
Sbjct 241278 TCGACAACG-GAGGGAATGGAACGCT 241254
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547214440434400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |