Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq12 241 1e-58 seq3 95.1 1e-14 >seq12 Length=996256 Score = 241 bits (266), Expect = 1e-58 Identities = 516/765 (67%), Gaps = 12/765 (2%) Strand=Plus/Plus Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGA---CTACACGCGT 53236 || ||| | || || ||||| || || | |||||||||||||| || | | | | Sbjct 676367 CCCCAGCACCTGTTGATGCGTGTTGCAGTTGGTATCCACGGTGAGGATATCGAAAAG--- 676423 Query 53237 GTCCGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTG 53296 | | |||||| ||| |||| ||| ||| |||| ||| || ||||| | || || ||| Sbjct 676424 GCCATTGAGACCTACCACTTGATGTCCCAGAAGTTCTTCACCCACGCTTCCCCCACACTG 676483 Query 53297 TTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGAT 53356 |||||||| ||||| | || || || | ||||||||||| | |||||||| Sbjct 676484 TTCAACGCCGGTACTCCTTCTCCCCAATTGGCTTCTTGCTTCCTGGTTGATATGAAGGAG 676543 Query 53357 GACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCG 53416 ||| || || || ||||| || || || ||| |||||| || |||||| | Sbjct 676544 GACAGCATTGAGGGTATCTATGACACTCTGAAGACCTGTGCCATGATTTCCAAGACCGCT 676603 Query 53417 GGTGGTATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGA 53474 |||||||| || | || || | || ||||||| | ||| | || || | Sbjct 676604 GGTGGTATTGGCTTGAACG--TCCACCGCATCCGTGCTACTGGCTCCTACATTGGCGGTA 676661 Query 53475 CGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGT 53534 | ||||| | || | || ||||| |||||||| || || ||||||||||| || || | Sbjct 676662 CCAACGGTTCCTCCAACGGTATCGTTCCTATGCTGCGTGTGTTCAACAACACCGCTCGCT 676721 Query 53535 ACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGC 53594 | ||| |||||||||| |||||| || | || ||||||||||| ||||| |||| Sbjct 676722 ATGTCGACCAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCCATCTACCTTGAGCCCTGGC 676781 Query 53595 ACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCT 53654 |||||||| | | ||||| | || ||||| ||| || ||| | || ||| | || | Sbjct 676782 ACGCCGACGTGTTCGAGTTCTTGGACCTGCGCAAGAACCACGGTAAGGAGGAGGTTCG-T 676840 Query 53655 GC-CGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAG 53713 || ||||| || || |||||||||| || || || |||||| | || ||| Sbjct 676841 GCTCGTGATCTCTTCTTCGCTCTGTGGACCCCTGATCTGTTCATGAAGCGTGTTGAGGCC 676900 Query 53714 GACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGT 53773 ||| || ||| ||| | ||||| |||||| ||| || || | |||||||| Sbjct 676901 AACGGTGACTGGACTCTGTTCTGCCCCAACGAGGCCCCTGGTCTTGCCGACGTCTACGGC 676960 Query 53774 GAGGAGTTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTC 53833 ||||||||| | | |||| || ||||| ||||||| | |||| || Sbjct 676961 GAGGAGTTTGATGCTCTGTACGAGAAGTACGAGAAGGAGGGCCGTGGCCGTAAGACCTTC 677020 Query 53834 AAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTAC 53893 ||||| | || | ||| |||| |||||| || ||| ||||| || | || | | Sbjct 677021 AAGGCTCAGAAGCTGTGGTATGCCATCCTCGAGGCTCAGACTGAGACTGGTAACCCCTTC 677080 Query 53894 ATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 ||| ||||||||| | |||| |||||||||||||||||| Sbjct 677081 ATGCTTTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAAC 677125 Score = 96.9 bits (106), Expect = 4e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCT 55846 ||||| |||||||| ||||| || |||||||||||||| ||||| |||| || | ||| Sbjct 677957 GCTGACCGTGGTGCCTACATTGATCAGTCCCAGTCTCTCAACATTCACATGAAGGAGCCT 678016 Query 55847 TCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906 | ||| ||| | | | |||||||| || ||||||| ||| || ||||| || Sbjct 678017 ACCATGGGTAAGATCACCAGTATGCACTTCGCTGGCTGGAAGATGGGTCTGAAGACTGGC 678076 Query 55907 ATGTACTATCTGCGGACC 55924 |||||||| ||||| ||| Sbjct 678077 ATGTACTACCTGCGTACC 678094 >seq3 Length=2224433 Score = 95.1 bits (104), Expect = 1e-14 Identities = 293/446 (66%), Gaps = 8/446 (2%) Strand=Plus/Minus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 |||||||| ||||| || ||||| || ||||||| ||| || || || || | |||| | Sbjct 241695 CCAGTTCCAATACCATCGGCACCGTTGATCAGAACCATGGGGACCACGGGCATGTAGGTC 241636 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCA-CTCGG 117270 || || || | || | || || || | ||| | | || | | |||| || || Sbjct 241635 TCGGGTTCGATCTTCTTGCCATCATCTTCGTTGTATGTCAACAAAGGCTCGTCAGCTTGG 241576 Query 117271 ATCGAATATGTTCTTGGTCC--ACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCA 117328 | ||| | || | || | |||||| || |||||| |||||||||||| ||| ||| Sbjct 241575 -TGGAAAACCTT--TCGTGCGAACGGTGACAGCCGAGTGTAAATGTAACGAGCGCTGGCA 241519 Query 117329 GCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGG 117388 ||| | ||||| |||||| |||| || | ||||| ||||| | ||| | | Sbjct 241518 CAATCGCTACCACCTTGAAGACGACTACCAAAGTTACCACTGGGCTCGAGACAGTTGATG 241459 Query 117389 TTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCA 117448 ||||| | || ||||| | || |||| ||||| || || || | ||| Sbjct 241458 TTGTTTGACCCAACAAAAGTCTGCGCCAGACCAACAATTGTCTGCTGAAGCGAGGTTTCA 241399 Query 117449 CCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCT 117508 || || || || || || | | | || || || |||| | | |||||||| || Sbjct 241398 CCGTGCTGGTAGGCAGTGAGTCCGGAGACATAACCTGCCAATTCCACAACCTTCATATCC 241339 Query 117509 GACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCA 117568 | |||| || ||||| ||||| |||| || || || |||| ||||| | ||| Sbjct 241338 TTCTTCAGATTGCGCTTGAAGCAGGAGTAAAGGACTTTACGTTGACCGGGCTTAAAGCCA 241279 Query 117569 TCCGCCACGTGAGGG-ATCGAACGCT 117593 || | ||| ||||| || ||||||| Sbjct 241278 TCGACAACG-GAGGGAATGGAACGCT 241254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214440434400