Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq1 104 1e-17 >seq1 Length=4666273 Score = 104 bits (114), Expect = 1e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| |||||||| ||||| ||||| || ||||| || || || || || || Sbjct 4323619 AGACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGA 4323560 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| ||||| || ||||| || || || | |||||| |||||||| || | |||||| Sbjct 4323559 CCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCC 4323500 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| |||| || | || ||| | || || || | |||||| |||| ||| Sbjct 4323499 TTGTCTTGGATC-TTGCTCTTGACGTTGTCGATAGTATCAGAGGACTCCACCTCCAGGGT 4323441 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || || | || || || || |||||||| Sbjct 4323440 AATAGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 4323402 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| |||||||| ||||| ||||| || ||||| || || || || || || Sbjct 4323391 AGACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGA 4323332 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| ||||| || ||||| || || || | |||||| |||||||| || | |||||| Sbjct 4323331 CCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCC 4323272 Query 34609 TTGTCTGTGATCTT 34622 ||||| |||||| Sbjct 4323271 TTGTCCTGGATCTT 4323258 Score = 89.7 bits (98), Expect = 3e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| ||||||||| |||||| || ||||| || || || || || || Sbjct 4323163 AGACGGAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGG 4323104 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || || || ||||| || || | |||||| |||||||| || | |||||| Sbjct 4323103 CCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGGATGCCCTCC 4323044 Query 34609 TTGTCTGTGATCTT 34622 ||||| |||||| Sbjct 4323043 TTGTCCTGGATCTT 4323030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314728725445124