Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq1 104 1e-17
>seq1
Length=4666273
Score = 104 bits (114), Expect = 1e-17
Identities = 156/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||||| |||||||| ||||| ||||| || ||||| || || || || || ||
Sbjct 4323619 AGACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGA 4323560
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
|||| ||||| || ||||| || || || | |||||| |||||||| || | ||||||
Sbjct 4323559 CCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCC 4323500
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|||||| |||| || | || ||| | || || || | |||||| |||| |||
Sbjct 4323499 TTGTCTTGGATC-TTGCTCTTGACGTTGTCGATAGTATCAGAGGACTCCACCTCCAGGGT 4323441
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || || || | || || || || ||||||||
Sbjct 4323440 AATAGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 4323402
Score = 93.3 bits (102), Expect = 3e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||||| |||||||| ||||| ||||| || ||||| || || || || || ||
Sbjct 4323391 AGACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGA 4323332
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
|||| ||||| || ||||| || || || | |||||| |||||||| || | ||||||
Sbjct 4323331 CCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCC 4323272
Query 34609 TTGTCTGTGATCTT 34622
||||| ||||||
Sbjct 4323271 TTGTCCTGGATCTT 4323258
Score = 89.7 bits (98), Expect = 3e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | ||||| ||||||||| |||||| || ||||| || || || || || ||
Sbjct 4323163 AGACGGAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGG 4323104
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || || || || ||||| || || | |||||| |||||||| || | ||||||
Sbjct 4323103 CCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGGATGCCCTCC 4323044
Query 34609 TTGTCTGTGATCTT 34622
||||| ||||||
Sbjct 4323043 TTGTCCTGGATCTT 4323030
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314728725445124
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |