Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq1 159 8e-34
seq12 125 2e-23
seq10 118 2e-21
>seq1
Length=4666273
Score = 159 bits (176), Expect = 8e-34
Identities = 148/188 (79%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| | ||| ||||||||||| || |||||||| || || | ||||| | |||||
Sbjct 4323157 AGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGGCCATCC 4323098
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| |||||||| || || || ||||| ||||| | || |||||||||
Sbjct 4323097 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCC 4323038
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || ||||||||||||||| |||||||| | ||||| |||
Sbjct 4323037 TGGATCTTAGACTTGACATTGTCGATGGTGTCAGAGGACTCAACCTCCAAGGTGATGGTC 4322978
Query 211083 TTTCCCGT 211090
|| || ||
Sbjct 4322977 TTGCCAGT 4322970
Score = 158 bits (174), Expect = 3e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| |||||||| |||||||| || |||||||| ||||||| || || | |||||
Sbjct 4323968 AGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCC 4323909
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| |||||| || |||||||| || || || ||||| ||||| | || |||||||||
Sbjct 4323908 TCCAACTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCC 4323849
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || ||||| |||||||| || || || || || | |||||| |||
Sbjct 4323848 TGAATCTTGCTCTTGACGTTGTCGATGGTATCGGAAGACTCGACTTCCAAAGTGATAGTC 4323789
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || |||||||| || || | |||||
Sbjct 4323788 TTGCCAGTAAGAGTCTTGACGAAGATTTGCAT 4323757
Score = 152 bits (168), Expect = 1e-31
Identities = 161/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| | |||||||| || || || |||||||| || || | || || | || ||
Sbjct 4323385 AGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCC 4323326
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || |||||||| || || || ||||| || || | || |||||||||
Sbjct 4323325 TCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 4323266
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||||| || ||||||||||| || |||||||| |||||||| |||
Sbjct 4323265 TGGATCTTGGACTTCACATTGTCGATGGTGTCGGAAGACTCAACCTCAAGAGTGATGGTC 4323206
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| ||||| || || | ||||||
Sbjct 4323205 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4323174
Score = 107 bits (118), Expect = 4e-18
Identities = 95/119 (80%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| |||||||| ||||||||||| |||||||| || |||| ||| || | |||||
Sbjct 3064411 AGGACGAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCC 3064470
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
|| |||||||| || |||||||| || || || ||||| || || | || ||||||||
Sbjct 3064471 TCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTC 3064529
>seq12
Length=996256
Score = 125 bits (138), Expect = 2e-23
Identities = 187/264 (71%), Gaps = 6/264 (2%)
Strand=Plus/Minus
Query 178093 GTTCTTTTGGTTGCTCTTTC---TGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149
|||||| ||||||||||| | ||||| ||||| ||||| |||||||| | ||
Sbjct 677125 GTTCTTCTGGTTGCTCTTGCGGTTGCAA---GCATCCTTGTAAAGCATGAAGGGGTTACC 677069
Query 178150 CACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTT 178209
||||| |||||| |||| ||| || ||| |||| ||| || || |||||
Sbjct 677068 AGTCTCAGTCTGAGCCTCGAGGATGGCATACCACAGCTTCTGAGCCTTGAAGGTCTTACG 677009
Query 178210 GGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATC 178269
| | || || ||||||||||| | ||| || | || || ||| || ||||| ||
Sbjct 677008 GCCACGGCCCTCCTTCTCGTACTTCTCGTACAGAGCATCAAACTCCTCGCCGTAGACGTC 676949
Query 178270 ATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCG 178329
| ||||| || ||||| ||||||||||| ||| |||| | ||||| ||| || ||
Sbjct 676948 GGCAAGACCAGGGGCCTCGTTGGGGCAGAACAGAGTCCAGTCACCGTTGGCCTCAACACG 676889
Query 178330 TTTCATGAAGAGGTCAGAGGTCCA 178353
|||||||| || |||| ||||||
Sbjct 676888 CTTCATGAACAGATCAGGGGTCCA 676865
>seq10
Length=1051362
Score = 118 bits (130), Expect = 2e-21
Identities = 136/182 (75%), Gaps = 6/182 (3%)
Strand=Plus/Minus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || || || | ||||| || ||||||||||| ||||||||
Sbjct 358833 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 358774
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
|| ||||| || || || |||| || ||||||||||||||||| || ||||| |||
Sbjct 358773 AGACGTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 358714
Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103
|||||||| ||| || || ||||| || || ||||| ||||| || ||||| ||
Sbjct 358713 ATGGTGTC---GCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 358657
Query 211104 AA 211105
||
Sbjct 358656 AA 358655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159148613827220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |