Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq12 141 1e-28 >seq12 Length=996256 Score = 141 bits (156), Expect = 1e-28 Identities = 572/896 (64%), Gaps = 4/896 (0%) Strand=Plus/Minus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 ||||| || || || | || || | | |||||| || || || || | || | | Sbjct 676971 TCAAACTCCTCGCCGTAGACGTCGGCAAGACCAGGGGCCTCGTTGGGGCAGAACAGAGTC 676912 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || ||||| | ||| ||| || ||||| || |||||||| |||| ||||| | || Sbjct 676911 CAGTCACCGTTGGCCTCAACACGCTTCATGAACAGATCAGGGGTCCACAGAGCGAAGAAG 676852 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 ||||| || | | | || || || || ||||| || || | |||||| | Sbjct 676851 AGATCACGAGCACGAACCTCCTCCTTACCGTGGTTCTTGCGCAGGTCCAAGAACTCGAAC 676792 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 | || | ||||| || || || || || || | |||| || || || || || ||| Sbjct 676791 ACGTCGGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCC 676732 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 || || | ||| | || ||||| || | || | || ||| |||| || ||||| || Sbjct 676731 TGGTCGACATAGCGAGCGGTGTTGTTGAACACACGCAGCATAGGAACGATACCGTTGGAG 676672 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879 | ||| || || || ||| || ||| ||||| || | | ||| Sbjct 676671 GAACCGTTGGTACCGCCAATGTAGGAGCCAGTAGCACGGATGCGGTGGACGTTCAAGCCA 676612 Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939 || || || || | || || || | |||||| |||| ||||||||||| ||||| Sbjct 676611 ATACCACCAGCGGTCTTGGAAATCATGGCACAGGTCTTCAGAGTGTCATAGATACCCTCA 676552 Query 76940 ATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 76999 || || || ||| |||| | || || || || || || ||| || | ||| || Sbjct 676551 ATGCTGTCCTCCTTCATATCAACCAGGAAGCAAGAAGCCAATTGGGGAGAAGGAGTACCG 676492 Query 77000 GCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTT 77059 || || |||| ||| || || || || ||||| | || | || | | | ||| || Sbjct 676491 GCGTTGAACAGTGTGGGGGAAGCGTGGGTGAAGAACTTCTGGGACATCAAGTGGTAGGTC 676432 Query 77060 TCAATAACTGCTTCTATATCC-CATTGATGAATTCCTACAGCGACACGCATCAACATATG 77118 ||||| | ||| |||||| || | || || || || || ||||||||||||| || Sbjct 676431 TCAATGGCCTTTTCGATATCCTCACCG-TGGATACCAACTGCAACACGCATCAACAGGTG 676373 Query 77119 CTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTT 77178 ||| || || || || |||| || || | || |||||| || | || || Sbjct 676372 CTGGGGACGCTCAGCAACCTTACCGTTGATGCGGAGCAGGTATGAACGCTCGAGGGTCTT 676313 Query 77179 AAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTC 77238 |||||||| ||||||| |||||| | ||||||| || |||| || || | || Sbjct 676312 GAAACCAAAGAAGTTGTAGTTAAAGTCACGGTCGTAAACGATGGCCGAGTTGAGCTCATC 676253 Query 77239 CTTATATTTGGTAACAATATCCATGACAGTGGT-AGAAATAATTGGAGATCGTATTCCAT 77297 | || |||| ||| || || ||| | ||| || || |||| | | | Sbjct 676252 GGCGTGCTTTGTAATAATCTCGTAGA-TGTGTTGAGAGATCATGGGAGCGGGCTTGTTGT 676194 Query 77298 TTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTT 77357 |||| || || ||||||| | | |||| || || | ||| | || || || | Sbjct 676193 TTTTGGGGTTGACATAGTGGTAAAGGTCTGAGATGACCATGGAGAATTGCTTCTTGGTCT 676134 Query 77358 CCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATGT 77413 |||||| || || || ||||| || | ||| || || || || |||||||| ||| Sbjct 676133 GCTTGTGGAGGTTGGAAACGGCGATACGAGCGGCCAGGATGGCGTAGTCAGGGTGT 676078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712932368136960