Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1 159 7e-34 seq10 143 6e-29 seq2 91.5 3e-13 seq5 87.8 4e-12 seq3 84.2 5e-11 >seq1 Length=4666273 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || |||| ||| | || ||| || |||||||||||||| | Sbjct 4323401 ACCACCACGCAGACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGA 4323342 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| || ||||| || || || || || ||||| | ||| || ||||| || Sbjct 4323341 GAGAGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 4323282 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| | || || | ||||| ||||| |||| || || Sbjct 4323281 GATACCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGAAGACTCAAC 4323222 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| ||||| || || | ||||| ||||| |||||||| Sbjct 4323221 CTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4323174 Score = 154 bits (170), Expect = 3e-32 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || |||| ||| | || ||| || |||||||||||||| | Sbjct 4323629 ACCACCACGCAGACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGA 4323570 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| || ||||| || || || || || ||||| | ||| || ||||| || Sbjct 4323569 GAGAGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 4323510 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||||||||||||||||||||| ||||| || ||| | |||||||| || || | || | Sbjct 4323509 GATACCCTCCTTGTCTTGGATC-TTGCTCTTGACGTTGTCGATAGTATCAGAGGACTCCA 4323451 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || || || || ||||| || || | ||||| ||||| |||||||| Sbjct 4323450 CCTCCAGGGTAATAGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 4323402 Score = 152 bits (168), Expect = 1e-31 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| ||||| || || ||||| || | ||| || || ||||||||||| || | Sbjct 4323983 CCACCGCGCAGACGGAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAG 4323924 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| |||||||| | || || || || ||||||| ||| || ||||| || Sbjct 4323923 AGAGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGAGGG 4323864 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| || ||| ||||| || ||| | ||||| || || |||| ||||| Sbjct 4323863 ATACCCTCCTTGTCCTGAATC-TTGCTCTTGACGTTGTCGATGGTATCGGAAGACTCGAC 4323805 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | |||||| ||||| || || | |||||| ||||| || ||||| Sbjct 4323804 TTCCAAAGTGATAGTCTTGCCAGTAAGAGTCTTGACGAAGATTTGCAT 4323757 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || | ||| || || |||||||||||||||| Sbjct 4323173 ACCACCACGGAGACGGAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 4323114 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||||||||| || || || ||||| ||||||| ||| || ||||| || Sbjct 4323113 GAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGG 4323054 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || || | ||||| ||||| || | || || Sbjct 4323053 GATGCCCTCCTTGTCCTGGATCTTAGACTTGACATTGTCGATGGTGTCAGAGGACTCAAC 4322994 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCA 283077 || | ||||| ||||| || |||| Sbjct 4322993 CTCCAAGGTGATGGTCTTGCCAGTCA 4322968 Score = 120 bits (132), Expect = 6e-22 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || || || || | ||| ||||| |||||||||||||| | Sbjct 3064395 ACCACCACGCAGGCGGAGGACGAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCCGA 3064454 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||||||||| || || || || || ||||||| ||| || ||||| || Sbjct 3064455 AAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGG 3064514 Query 282992 AATACCCTCCTTGTCT 283007 ||||||||||||||| Sbjct 3064515 GATACCCTCCTTGTCT 3064530 >seq10 Length=1051362 Score = 143 bits (158), Expect = 6e-29 Identities = 139/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| || |||||||||||||| || || || ||||| |||||| Sbjct 358833 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 358774 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | |||||| || || ||||| ||||||||||| |||||||| | || ||| | ||| Sbjct 358773 AGACGTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 358714 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||| | ||||| ||||| || || ||||||||||||| ||||| ||||| Sbjct 358713 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 358655 >seq2 Length=2385438 Score = 91.5 bits (100), Expect = 3e-13 Identities = 152/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 230191 AGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250 |||||||| | || || |||| || ||| | |||||||| || | |||||| Sbjct 270552 AGGAGTTCCTGACTGATGCCCTTCCCTGTGCTCTGCTTGGCATGAACGCCAAGCTCATGT 270611 Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310 | ||||| ||||| ||||| ||||| ||| | | || || || || || |||| | Sbjct 270612 GCCAATACATCGAGTTCGTCGCTGACCGTCTCCTGGTCGCTCTCGGCAACCAGAAGTACT 270671 Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370 || ||| |||||||||| || |||||| || || || || || || |||| Sbjct 270672 TCAATGCCACCAACCCCTTCGACTTCATGGAGTCTATCTCTCTGGCTGGCAAGACCAACT 270731 Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 ||||||| ||||||||| | || || || | | ||||||| Sbjct 270732 TCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCCGGTGT 270771 >seq5 Length=1529696 Score = 87.8 bits (96), Expect = 4e-12 Identities = 146/211 (69%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 316634 TGATAGA----AGTACAGACAGCATCGAGGAAACCAGAATCGTGTGATACAATCACACAT 316689 ||||||| ||| ||||| |||| ||||||||||| ||||| || ||||||| || Sbjct 519647 TGATAGATGTCAGTGCAGACCTCATCAAGGAAACCAGAGTCGTGAGAAACAATCAAACTG 519588 Query 316690 GAAACGCCTTTTAGGTTGACCAGATAGTCGATCAGCCAGCTCACATTCGACACAGAAAGA 316749 | || | | | || || || || |||||| |||| || | ||| | Sbjct 519587 GTAATTTGTGTGTGCTTCTTGAGGTACTCTTGCAGCCACTTCACGTTTGCAACATCCAAG 519528 Query 316750 TGGTTGGTCGGTTCGTCAAGTAGTAGTAGCTTCGCGTCCAACAGCATAGCGCGTGCGAGA 316809 ||||| || |||||||| || || || | | || | | |||||| ||||| || ||| Sbjct 519527 TGGTTAGTAGGTTCGTCCAGGAGGAGGACATCGGCCTTCTGCAGCATGGCGCGAGCAAGA 519468 Query 316810 GCAAGCTTCATTTTCCACCCCCCGGAAAGAG 316840 || |||||||| ||||| || ||||| |||| Sbjct 519467 GCCAGCTTCATCTTCCAACCACCGGATAGAG 519437 >seq3 Length=2224433 Score = 84.2 bits (92), Expect = 5e-11 Identities = 243/374 (65%), Gaps = 0/374 (0%) Strand=Plus/Minus Query 273687 TCGGGCTCAATTTTATCACCATCGTCGTAAAGGTACTTCAACAAAGCATCATCCGTATCA 273746 ||||| || || || | ||||| || | ||| ||||||||| || || | | Sbjct 241635 TCGGGTTCGATCTTCTTGCCATCATCTTCGTTGTATGTCAACAAAGGCTCGTCAGCTTGG 241576 Query 273747 ACGAAAACCTTTCGCGTCTGAGGATTCAGTTTCGTGAAAATGTACCTGGCACTCGCATGG 273806 |||||||||||| | || ||| ||| ||||||| | || || ||| Sbjct 241575 TGGAAAACCTTTCGTGCGAACGGTGACAGCCGAGTGTAAATGTAACGAGCGCTGGCACAA 241516 Query 273807 TCCTTGCCACCTTGCAGCCTCGAACCAAACTGACCCTCGGGCAGTAGCCAGTTTATGTTG 273866 || | |||||||| || | |||||| | ||| |||| || ||||| |||||| Sbjct 241515 TCGCTACCACCTTGAAGACGACTACCAAAGTTACCACTGGGCTCGAGACAGTTGATGTTG 241456 Query 273867 TTGCTACCGACGTAATCCTGAGCCATATTCACGATAGTCCCCTGAAGGGATACCTCGCCG 273926 || || || || ||| |||| | || || ||| |||||| || || ||| Sbjct 241455 TTTGACCCAACAAAAGTCTGCGCCAGACCAACAATTGTCTGCTGAAGCGAGGTTTCACCG 241396 Query 273927 TGGTGATAGGCGCTGTGTTCGGCGATATAACCACTGAACTGAGCAACCTTCACATCGCTC 273986 || || ||||| || || ||| || |||||| || | ||||||||| ||| || Sbjct 241395 TGCTGGTAGGCAGTGAGTCCGGAGACATAACCTGCCAATTCCACAACCTTCATATCCTTC 241336 Query 273987 GTCAAGTTTCGCTTGAATGCGGAATACAACACCTTCCGCTGCGAGGGCTTGAACCCATCA 274046 ||| || |||||||| ||| || | || || || || |||||| || ||||| Sbjct 241335 TTCAGATTGCGCTTGAAGCAGGAGTAAAGGACTTTACGTTGACCGGGCTTAAAGCCATCG 241276 Query 274047 ACGACCGATGGAAT 274060 || || || ||||| Sbjct 241275 ACAACGGAGGGAAT 241262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046736142213112