Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq1 159 7e-34
seq10 143 6e-29
seq2 91.5 3e-13
seq5 87.8 4e-12
seq3 84.2 5e-11
>seq1
Length=4666273
Score = 159 bits (176), Expect = 7e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||||||||| || || |||| ||| | || ||| || |||||||||||||| |
Sbjct 4323401 ACCACCACGCAGACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGA 4323342
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| ||||| || ||||| || || || || || ||||| | ||| || ||||| ||
Sbjct 4323341 GAGAGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 4323282
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||||||||||| |||||||| | || || | ||||| ||||| |||| || ||
Sbjct 4323281 GATACCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGAAGACTCAAC 4323222
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| |||||||| ||||| || || | ||||| ||||| ||||||||
Sbjct 4323221 CTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4323174
Score = 154 bits (170), Expect = 3e-32
Identities = 173/229 (76%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||||||||| || || |||| ||| | || ||| || |||||||||||||| |
Sbjct 4323629 ACCACCACGCAGACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGA 4323570
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| ||||| || ||||| || || || || || ||||| | ||| || ||||| ||
Sbjct 4323569 GAGAGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 4323510
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
||||||||||||||||||||| ||||| || ||| | |||||||| || || | || |
Sbjct 4323509 GATACCCTCCTTGTCTTGGATC-TTGCTCTTGACGTTGTCGATAGTATCAGAGGACTCCA 4323451
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
| || || || || ||||| || || | ||||| ||||| ||||||||
Sbjct 4323450 CCTCCAGGGTAATAGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 4323402
Score = 152 bits (168), Expect = 1e-31
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| ||||| || || ||||| || | ||| || || ||||||||||| || |
Sbjct 4323983 CCACCGCGCAGACGGAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAG 4323924
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| ||||| |||||||| | || || || || ||||||| ||| || ||||| ||
Sbjct 4323923 AGAGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGAGGG 4323864
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||||||||||| || ||| ||||| || ||| | ||||| || || |||| |||||
Sbjct 4323863 ATACCCTCCTTGTCCTGAATC-TTGCTCTTGACGTTGTCGATGGTATCGGAAGACTCGAC 4323805
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| | |||||| ||||| || || | |||||| ||||| || |||||
Sbjct 4323804 TTCCAAAGTGATAGTCTTGCCAGTAAGAGTCTTGACGAAGATTTGCAT 4323757
Score = 132 bits (146), Expect = 1e-25
Identities = 153/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || |||| || | ||| || || ||||||||||||||||
Sbjct 4323173 ACCACCACGGAGACGGAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 4323114
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||||||||| || || || ||||| ||||||| ||| || ||||| ||
Sbjct 4323113 GAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGG 4323054
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| | || || | ||||| ||||| || | || ||
Sbjct 4323053 GATGCCCTCCTTGTCCTGGATCTTAGACTTGACATTGTCGATGGTGTCAGAGGACTCAAC 4322994
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCA 283077
|| | ||||| ||||| || ||||
Sbjct 4322993 CTCCAAGGTGATGGTCTTGCCAGTCA 4322968
Score = 120 bits (132), Expect = 6e-22
Identities = 108/136 (79%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||||||| || || || || | ||| ||||| |||||||||||||| |
Sbjct 3064395 ACCACCACGCAGGCGGAGGACGAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCCGA 3064454
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| |||||||||||||| || || || || || ||||||| ||| || ||||| ||
Sbjct 3064455 AAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGG 3064514
Query 282992 AATACCCTCCTTGTCT 283007
|||||||||||||||
Sbjct 3064515 GATACCCTCCTTGTCT 3064530
>seq10
Length=1051362
Score = 143 bits (158), Expect = 6e-29
Identities = 139/179 (78%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| || |||||||||||||| || || || ||||| ||||||
Sbjct 358833 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 358774
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
| |||||| || || ||||| ||||||||||| |||||||| | || ||| | |||
Sbjct 358773 AGACGTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 358714
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| ||||| | ||||| ||||| || || ||||||||||||| ||||| |||||
Sbjct 358713 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 358655
>seq2
Length=2385438
Score = 91.5 bits (100), Expect = 3e-13
Identities = 152/220 (69%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 230191 AGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250
|||||||| | || || |||| || ||| | |||||||| || | ||||||
Sbjct 270552 AGGAGTTCCTGACTGATGCCCTTCCCTGTGCTCTGCTTGGCATGAACGCCAAGCTCATGT 270611
Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310
| ||||| ||||| ||||| ||||| ||| | | || || || || || |||| |
Sbjct 270612 GCCAATACATCGAGTTCGTCGCTGACCGTCTCCTGGTCGCTCTCGGCAACCAGAAGTACT 270671
Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370
|| ||| |||||||||| || |||||| || || || || || || ||||
Sbjct 270672 TCAATGCCACCAACCCCTTCGACTTCATGGAGTCTATCTCTCTGGCTGGCAAGACCAACT 270731
Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410
||||||| ||||||||| | || || || | | |||||||
Sbjct 270732 TCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCCGGTGT 270771
>seq5
Length=1529696
Score = 87.8 bits (96), Expect = 4e-12
Identities = 146/211 (69%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 316634 TGATAGA----AGTACAGACAGCATCGAGGAAACCAGAATCGTGTGATACAATCACACAT 316689
||||||| ||| ||||| |||| ||||||||||| ||||| || ||||||| ||
Sbjct 519647 TGATAGATGTCAGTGCAGACCTCATCAAGGAAACCAGAGTCGTGAGAAACAATCAAACTG 519588
Query 316690 GAAACGCCTTTTAGGTTGACCAGATAGTCGATCAGCCAGCTCACATTCGACACAGAAAGA 316749
| || | | | || || || || |||||| |||| || | ||| |
Sbjct 519587 GTAATTTGTGTGTGCTTCTTGAGGTACTCTTGCAGCCACTTCACGTTTGCAACATCCAAG 519528
Query 316750 TGGTTGGTCGGTTCGTCAAGTAGTAGTAGCTTCGCGTCCAACAGCATAGCGCGTGCGAGA 316809
||||| || |||||||| || || || | | || | | |||||| ||||| || |||
Sbjct 519527 TGGTTAGTAGGTTCGTCCAGGAGGAGGACATCGGCCTTCTGCAGCATGGCGCGAGCAAGA 519468
Query 316810 GCAAGCTTCATTTTCCACCCCCCGGAAAGAG 316840
|| |||||||| ||||| || ||||| ||||
Sbjct 519467 GCCAGCTTCATCTTCCAACCACCGGATAGAG 519437
>seq3
Length=2224433
Score = 84.2 bits (92), Expect = 5e-11
Identities = 243/374 (65%), Gaps = 0/374 (0%)
Strand=Plus/Minus
Query 273687 TCGGGCTCAATTTTATCACCATCGTCGTAAAGGTACTTCAACAAAGCATCATCCGTATCA 273746
||||| || || || | ||||| || | ||| ||||||||| || || | |
Sbjct 241635 TCGGGTTCGATCTTCTTGCCATCATCTTCGTTGTATGTCAACAAAGGCTCGTCAGCTTGG 241576
Query 273747 ACGAAAACCTTTCGCGTCTGAGGATTCAGTTTCGTGAAAATGTACCTGGCACTCGCATGG 273806
|||||||||||| | || ||| ||| ||||||| | || || |||
Sbjct 241575 TGGAAAACCTTTCGTGCGAACGGTGACAGCCGAGTGTAAATGTAACGAGCGCTGGCACAA 241516
Query 273807 TCCTTGCCACCTTGCAGCCTCGAACCAAACTGACCCTCGGGCAGTAGCCAGTTTATGTTG 273866
|| | |||||||| || | |||||| | ||| |||| || ||||| ||||||
Sbjct 241515 TCGCTACCACCTTGAAGACGACTACCAAAGTTACCACTGGGCTCGAGACAGTTGATGTTG 241456
Query 273867 TTGCTACCGACGTAATCCTGAGCCATATTCACGATAGTCCCCTGAAGGGATACCTCGCCG 273926
|| || || || ||| |||| | || || ||| |||||| || || |||
Sbjct 241455 TTTGACCCAACAAAAGTCTGCGCCAGACCAACAATTGTCTGCTGAAGCGAGGTTTCACCG 241396
Query 273927 TGGTGATAGGCGCTGTGTTCGGCGATATAACCACTGAACTGAGCAACCTTCACATCGCTC 273986
|| || ||||| || || ||| || |||||| || | ||||||||| ||| ||
Sbjct 241395 TGCTGGTAGGCAGTGAGTCCGGAGACATAACCTGCCAATTCCACAACCTTCATATCCTTC 241336
Query 273987 GTCAAGTTTCGCTTGAATGCGGAATACAACACCTTCCGCTGCGAGGGCTTGAACCCATCA 274046
||| || |||||||| ||| || | || || || || |||||| || |||||
Sbjct 241335 TTCAGATTGCGCTTGAAGCAGGAGTAAAGGACTTTACGTTGACCGGGCTTAAAGCCATCG 241276
Query 274047 ACGACCGATGGAAT 274060
|| || || |||||
Sbjct 241275 ACAACGGAGGGAAT 241262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046736142213112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |