Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1 138 8e-28 seq10 96.9 2e-15 >seq1 Length=4666273 Score = 138 bits (152), Expect = 8e-28 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 ||||||||||| ||| |||||| |||||||||||||| | ||| ||| | || ||| Sbjct 4323965 ACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCCTCC 4323906 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||| || || ||||||| ||||||||| || | ||| | ||| ||||| ||| Sbjct 4323905 AACTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGA 4323846 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | ||||| |||| || || || |||| || || ||||| Sbjct 4323845 ATCTTGCTCTTGACGTTGTCGATGGTATCGGAAGACTCGACTTCCAAAGTGATAGTCTTG 4323786 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || ||||| |||||||||||||| Sbjct 4323785 CCAGTAAGAGTCTTGACGAAGATTTGCAT 4323757 Score = 132 bits (146), Expect = 3e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | || |||| ||||| || ||||| ||||||||||| || Sbjct 4323404 CATACCACCACGCAGACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTC 4323345 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| ||| |||| || |||||||| || || ||||| | ||||||||| || | Sbjct 4323344 GGAGAGAGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGG 4323285 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||| ||||| ||| ||||| ||||| | | |||||||||| || || Sbjct 4323284 GGGGATACCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGAAGACTC 4323225 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | || || ||||| || ||||||||||| |||||||| ||||| Sbjct 4323224 AACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4323174 Score = 132 bits (146), Expect = 3e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | || |||| ||||| || ||||| ||||||||||| || Sbjct 4323632 CATACCACCACGCAGACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTC 4323573 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| ||| |||| || |||||||| || || ||||| | ||||||||| || | Sbjct 4323572 GGAGAGAGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGG 4323513 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||| ||||| || ||||| ||| | | | || || || | ||| || Sbjct 4323512 GGGGATACCCTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATAGTATCAGAGGACTC 4323453 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| ||||| |||||||| ||||||||||| |||||||| ||||| Sbjct 4323452 CACCTCCAGGGTAATAGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 4323402 Score = 107 bits (118), Expect = 1e-18 Identities = 137/187 (73%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || ||| |||||| ||||||||||| || | ||| || | || ||| Sbjct 4323154 ACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGGCCATCCTCC 4323095 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||||| ||||||||| || | ||| | || ||||| ||| Sbjct 4323094 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGG 4323035 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | |||||||| | ||| || ||||||| || || |||| Sbjct 4323034 ATCTTAGACTTGACATTGT--CGATGGTGTCAGAGGACTCAACCTCCAAGGTGATGGTCT 4322977 Query 44307 TTCCCGT 44313 | || || Sbjct 4322976 TGCCAGT 4322970 >seq10 Length=1051362 Score = 96.9 bits (106), Expect = 2e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| ||||||||||| ||| || ||| | || || |||||||| ||||| |||| Sbjct 358835 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 358776 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267 ||| ||| |||||||| | || | || ||||| ||| ||||| ||| | | Sbjct 358775 TCAGACGTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 358716 Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327 | ||||||||| || || || || | ||||| ||||| ||||| |||||||| |||| Sbjct 358715 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 358656 Query 44328 A 44328 | Sbjct 358655 A 358655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989399676676