Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1 141 2e-28 seq10 123 6e-23 seq12 104 6e-17 >seq1 Length=4666273 Score = 141 bits (156), Expect = 2e-28 Identities = 152/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| ||||| || || ||||| |||||||| ||| || Sbjct 4323405 CAGATCTTCGTCAAGACCCTCACTGGAAAGACTATTACCCTGGAGGTGGAGTCCTCTGAT 4323464 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||| || ||||| || || ||||| ||||||||||| Sbjct 4323465 ACTATCGACAACGTCAAGAGCAAGATCCAAGACAAGGAGGGTATCCCCCCGGACCAGCAG 4323524 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| || || || | ||||| |||| || ||| || Sbjct 4323525 CGTCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGTCGCACTCTCTCCGACTACAACATC 4323584 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || || ||||| || || ||| Sbjct 4323585 CAGAAGGAATCTACTCTTCAT 4323605 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||||| || || || || ||||| | || || || || || Sbjct 4323760 CAAATCTTCGTCAAGACTCTTACTGGCAAGACTATCACTTTGGAAGTCGAGTCTTCCGAT 4323819 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| |||||||||||||| || || ||||||||||||||||| Sbjct 4323820 ACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGTATCCCTCCGGACCAGCAG 4323879 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| ||||| ||| | || ||||| | ||||| | ||||| ||| || Sbjct 4323880 CGTCTGATCTTCGCTGGAAAGCAGTTGGAGGATGGTCGCACTCTCTCGGATTACAACATC 4323939 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 4323940 CAGAAGGAGTCCACCCTTCACCTGGT 4323965 Score = 132 bits (146), Expect = 1e-25 Identities = 150/201 (75%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || ||||| || ||||| || || ||| Sbjct 4323177 CAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTTGAGTCTTCCGAC 4323236 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||||| |||||||| || || ||||| ||||||||||| Sbjct 4323237 ACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAG 4323296 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| || || || | ||||| |||| || ||| || Sbjct 4323297 CGTCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGTCGCACTCTCTCCGACTACAACATC 4323356 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || || ||||| || || ||| Sbjct 4323357 CAGAAGGAATCTACTCTTCAT 4323377 Score = 125 bits (138), Expect = 2e-23 Identities = 139/184 (76%), Gaps = 1/184 (1%) Strand=Plus/Plus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 || || || || |||||| | ||||| || ||| ||||||||||| || ||||| Sbjct 4322970 ACTGGCAAGACCATCACCTTGGAGGTTGAGTCCTCTGACACCATCGACAATGTCAAGTCT 4323029 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| |||||||| || || ||||||||||||||||| || || ||||||||||| || Sbjct 4323030 AAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAGCGTCTGATCTTCGCCGGCAAG 4323089 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 ||||| || ||||| | || || | || || ||| |||| || || || || || || Sbjct 4323090 CAGCTGGAGGATGGCCGTACCCTCTCTGACTACAACATCCAGAAGGAGTCCACTCTCCA- 4323148 Query 178125 CTTG 178128 |||| Sbjct 4323149 CTTG 4323152 Score = 93.3 bits (102), Expect = 1e-13 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| || || ||||| ||||||||||| || || |||||||| || || |||||||| Sbjct 3064529 GACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAG 3064470 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 ||||| | |||||| | || || ||| |||| ||||| || || || || || || Sbjct 3064469 GATGGCCGCACTCTTTCGGACTACAACATCCAGAAAGAGTCCACCCTTCACCTCGT 3064414 >seq10 Length=1051362 Score = 123 bits (136), Expect = 6e-23 Identities = 138/183 (75%), Gaps = 6/183 (3%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 358654 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGC---GACAC 358710 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| |||||||| || || || || ||||| |||||||| Sbjct 358711 CATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCGGATCAGCAACG 358770 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || ||||||||||| || |||||||| ||||| | ||||| ||| || ||| |||| Sbjct 358771 TCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTACAACATCCA 358830 Query 178106 AAA 178108 || Sbjct 358831 GAA 358833 >seq12 Length=996256 Score = 104 bits (114), Expect = 6e-17 Identities = 182/264 (69%), Gaps = 6/264 (2%) Strand=Plus/Minus Query 214128 GTTTTTCTGGTTGCTTTTGCGG---CAAATGGCATCTTTGTATGCGATGAAAGGCATTCC 214184 ||| ||||||||||| |||||| ||| ||||| ||||| ||||| || | || Sbjct 677125 GTTCTTCTGGTTGCTCTTGCGGTTGCAA---GCATCCTTGTAAAGCATGAAGGGGTTACC 677069 Query 214185 CACCTCGACTTGAGCGACAAGAATGTGATGCCAGAGTTCTTGGGCCTTCACGACCTTTTT 214244 ||| ||||| | || ||| || ||| || | || ||||| | | ||| Sbjct 677068 AGTCTCAGTCTGAGCCTCGAGGATGGCATACCACAGCTTCTGAGCCTTGAAGGTCTTACG 677009 Query 214245 GGCTCTTCCCTCGTTTTCGTACTTTTCATAAAGAGACTCAAATTCCGAACCGTAGACATC 214304 | | | ||||| || |||||||| || || |||| ||||| ||| |||||||| || Sbjct 677008 GCCACGGCCCTCCTTCTCGTACTTCTCGTACAGAGCATCAAACTCCTCGCCGTAGACGTC 676949 Query 214305 ATCAAGACCGGGAGCCTCGTTGGGGCAGAAAAGACTCCATTGTCCATTATCCCTGACTCT 214364 ||||||| || ||||||||||||||||| ||| |||| | || || || || | Sbjct 676948 GGCAAGACCAGGGGCCTCGTTGGGGCAGAACAGAGTCCAGTCACCGTTGGCCTCAACACG 676889 Query 214365 TTTCATGAAAAGGTCGGAAGTCCA 214388 |||||||| || || | ||||| Sbjct 676888 CTTCATGAACAGATCAGGGGTCCA 676865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203727683600232