Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F000952775.2_202016-05-01] 7 sequences; 35,233,101 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq2 116 4e-21 >seq2 Length=4277548 Score = 116 bits (128), Expect = 4e-21 Identities = 118/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185 |||| || ||| ||||| || ||| |||||||| || | | || | |||||||| Sbjct 2616874 AACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCATCACGAGAGATCAGCTCGTTGGAG 2616933 Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245 || ||||| || ||||| ||||||||||| || ||||| || ||||| || ||||| ||| Sbjct 2616934 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCA 2616993 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 24279 || ||||| || || || || || |||||||||| Sbjct 2616994 GAGAAGAAGATACCCTCGACAGCGGCAAAGGCAA 2617027 Score = 104 bits (114), Expect = 3e-17 Identities = 550/871 (63%), Gaps = 22/871 (3%) Strand=Plus/Plus Query 53804 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATC 53863 || |||||||| ||||| || |||||||| || || ||||| || ||||||| || || Sbjct 56105 TGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTC 56164 Query 53864 TGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTT 53923 |||| || | ||| || | ||||| ||||||| || | || | | Sbjct 56165 TGGGCCTCAAGAATGGCGTACCAGAGCTTCTGAGCCTTGATGGTC--TTGCGGCCACGGC 56222 Query 53924 TCTCTT--TCGTA--TAGTGTATACA--ATCGTTCAAACTCGTCTCCCCAAACATTGTCC 53977 ||| | ||||| | | ||| | | |||| ||||| || || | |||| || Sbjct 56223 CCTCCTGCTCGTACTTCGCGTAGAGAGCATCG----AACTCATCACCGTAGACATCAGCC 56278 Query 53978 AATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 54037 | || || || | || || | | | ||| || |||| ||| || || ||| Sbjct 56279 AGACCGGGGGCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTC 56338 Query 54038 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 54097 || |||||||| || |||| | ||| || || || | | | | ||||| || Sbjct 56339 ATGAAGAGATCGGGGGTCCACAAAGCGTAGAAGAGGTCACGAGCACGAACCTCCTCCTTA 56398 Query 54098 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 54157 || ||||| |||||||||||| | | | ||| | |||||||| |||| ||| Sbjct 56399 CCGTGGTTCTTCCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAG 56458 Query 54158 ATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 54217 |||| | | ||||| || ||||| || ||||| || | || | || ||||| ||| Sbjct 56459 ATGGCAAATGCACCAGGGCGCTTGTTACCACCCTGGTCGACATAGCGTGCAGTGTTGTTA 56518 Query 54218 TAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTT 54277 | || | || ||| |||| |||||| ||||| | || ||||| || || || Sbjct 56519 AACACACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAA 56578 Query 54278 CCACTGGCACGAATA--TTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTA 54335 || | || |||||| | |||| ||||| || || || || | || ||||| | Sbjct 56579 CCGGTAGCGCGAATACGGTGGACATTG--AGACCGATACCACCAGCGGTCTTGGAGATCA 56636 Query 54336 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 54395 || || || | ||||| || || ||||| || || ||| | ||| | || || Sbjct 56637 TGGCACAGGTCTTGAGAGTATCGTAAATACCCTCAATGCTGTCAGCGCTCACATCAACTA 56696 Query 54396 GAAAACAGCTAGAC---ATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 54452 | | ||| |||| | ||| | | ||| | ||||| || | || || || | Sbjct 56697 GGA---AGCAAGACGCAAGCTGGGGCTGGGGAGTAGCGGCATTGAAAAGAGTGGGGGAGG 56753 Query 54453 CGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCC 54512 |||| || || | || | || | | | ||| ||||| || || || |||||| Sbjct 56754 CGTGGGTGAAGTACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATATCCT 56813 Query 54513 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 54572 ||| ||||| || || |||||||| | || ||||||||| | ||| | | ||| Sbjct 56814 CACCATGGATTCCGACAGCAACACGCATCAGCAAGTGCTGAGGACGCTCAGCAACATTGC 56873 Query 54573 TGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 54632 ||| || || | || || || | || || || || || ||||||| | Sbjct 56874 CGTTAATGCGAAGAAGATATGAACGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGA 56933 Query 54633 AGTCTCGTTCGTAAATAATAACTGAGTTGAG 54663 |||| || ||||| | ||| | |||||||| Sbjct 56934 AGTCACGGTCGTACACAATGGCCGAGTTGAG 56964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721548049360