Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F000952775.2_202016-05-01] 7 sequences; 35,233,101 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq2 192 6e-44 seq5 118 1e-21 seq1 107 2e-18 >seq2 Length=4277548 Score = 192 bits (212), Expect = 6e-44 Identities = 216/286 (76%), Gaps = 5/286 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| |||||||| || || |||||||| | ||| ||| | || || Sbjct 2617496 ATCTGGCAAATGTACAAGAAGGCCGAAGCCTCTTTCTGGACTGCCGAAGAGATTGATCTC 2617437 Query 116696 TCCAAGGA-CACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAA 116751 |||||||| | | | ||||||| | ||| |||||||| | ||||| | |||||| Sbjct 2617436 TCCAAGGATCTCCA-CGACTGGCACAACCGCCTGAACGACGATGAGCGTTACTTCATCTC 2617378 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 ||||| ||||| || || |||||| ||||||||| ||||||||||| || |||||||| Sbjct 2617377 CCACGTCCTGGCTTTCTTTGCCGCCTCCGACGGCATTGTCAACGAGAACCTTGTCGAGCG 2617318 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 |||| | ||||| ||| | ||||||| || |||||||||||||| |||||| || Sbjct 2617317 TTTCAGTTCCGAGGTCCAGATCCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCATGAT 2617258 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 |||||| | ||||| || | || || || |||||||| ||| Sbjct 2617257 GGAGAATATCCACTCCGAGACCTACTCCCTGCTTATCGACACCTAC 2617212 >seq5 Length=7653734 Score = 118 bits (130), Expect = 1e-21 Identities = 137/182 (75%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || ||||| || ||||| ||| |||| ||||| | | ||||| | | Sbjct 6493649 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 6493590 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| ||||| || || | ||||| |||||||| ||| | ||||| || || || Sbjct 6493589 GACAACG-TCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCGTCT 6493531 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| || || ||||| || || | |||||||| | |||||||||||||||||| Sbjct 6493530 GATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 6493471 Query 40878 GG 40879 || Sbjct 6493470 GG 6493469 >seq1 Length=11921518 Score = 107 bits (118), Expect = 2e-18 Identities = 143/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759 |||| || || || || || |||||||||||| | || ||||| ||| ||| | | Sbjct 6336378 TCGTCAAGACCCTGACTGGAAAAACCATCACCCTTGAGGTCGAGTCCAGCGATACTATCG 6336319 Query 40760 AAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCA 40819 | | | ||| || |||| || || ||||||||||| | |||||||| || |||| Sbjct 6336318 ATAATGTGAAGTCCAAGATTCAAGATAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTCA 6336259 Query 40820 TCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGG 40879 ||| ||| ||||| ||||| || || | || || || ||||||||| || ||||||| Sbjct 6336258 TCTTCGCAGGCAAGCAGCTTGAAGATGGTCGTACTCTTTCCGACTACAATATTCAGAAGG 6336199 Query 40880 AGGCCACGCTGCATCTAGT 40898 || | ||||| || || || Sbjct 6336198 AGTCAACGCTCCACCTCGT 6336180 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/188 (72%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770 |||| ||||| ||||||||| | || || || ||| ||| | | | |||| ||||| Sbjct 6336652 TCACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCGACAACG-TCAAG 6336594 Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830 || || | || || ||||||||||| | |||||||| || | |||| || ||| Sbjct 6336593 TCGAAGATCCAGGATAAGGAGGGCATCCCTCCTGACCAGCAGCGCTTGATCTTTGCCGGC 6336534 Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890 || ||||| || || | ||||||||| ||| || ||||| ||||||||| | || || Sbjct 6336533 AAGCAGCTTGAGGATGGCCGCACCCTCTCCGATTATAACATTCAGAAGGAGTCTACACTC 6336474 Query 40891 CATCTAGT 40898 || || || Sbjct 6336473 CACCTCGT 6336466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219154918320