Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F000952775.2_202016-05-01] 7 sequences; 35,233,101 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq1 136 3e-27 seq5 111 1e-19 >seq1 Length=11921518 Score = 136 bits (150), Expect = 3e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 |||||||| ||| | || ||||| || ||||| |||||||| | ||||||| || Sbjct 6335720 CAACACCAGGTGAAGAGTGGACTCCTTCTGAATATTGTAATCCGAAAGAGTGCGCCCGTC 6335779 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| ||||| || |||||| |||| ||||||||||| || ||||| || ||||||||||| Sbjct 6335780 CTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTC 6335839 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 || || || || | || | |||||| | |||||| ||||||| || | || Sbjct 6335840 CTGGATCTTGCTCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCGAGCGTAATAGT 6335899 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||||| ||| || ||||| || ||||| Sbjct 6335900 CTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 6335932 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || ||||| ||||| ||| | ||| || ||| || ||||| Sbjct 6336185 GTGGAGCGTTGACTCCTTCTGAATATTGTAGTCGGAAAGAGTACGACCATCTTCAAGCTG 6336244 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| |||||||||||||||| |||||||| ||||||||||| ||| ||| || Sbjct 6336245 CTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCTTGAATCTT 6336304 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| || || || ||||||||| | ||| | ||||| || || Sbjct 6336305 GGACTTCACATTATCGATAGTATCGCTGGACTCGACCTCAAGGGTGATGGTTTTTCCAGT 6336364 Query 118715 CAGAGTTTTTAC 118726 ||| || || || Sbjct 6336365 CAGGGTCTTGAC 6336376 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || ||||| ||||| ||| | ||| || ||| || || || Sbjct 6335957 GTGGAGCGTTGACTCCTTCTGAATATTGTAGTCGGAAAGAGTACGGCCATCTTCAAGTTG 6336016 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| |||| ||||||||||| || ||||| || ||||||||||| || || Sbjct 6336017 CTTGCCTGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTT 6336076 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | || | |||||| | |||||| ||||||| || | || || ||||| Sbjct 6336077 GCTCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCGAGCGTGATAGTCTTTCCGGT 6336136 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 || ||| || ||||| || ||||| Sbjct 6336137 CAAAGTCTTGACAAAGATTTGCAT 6336160 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| ||||||||| || |||||||| |||||| | ||||| |||||| ||||| Sbjct 6336471 GTGGAGTGTAGACTCCTTCTGAATGTTATAATCGGAGAGGGTGCGGCCATCCTCAAGCTG 6336530 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || || || |||| | |||||||| || ||||| ||||||||||| || Sbjct 6336531 CTTGCCGGCAAAGATCAAGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATC 6336581 Score = 84.2 bits (92), Expect = 2e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || ||||||||||| | |||||| |||||||||||| || || Sbjct 2088307 GTCGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCG 2088248 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 ||| |||| || ||||| || || || || || ||||||||||||| Sbjct 2088247 GCGAAGATCAGGCGCTGTTGGTCAGGGGGAATACCCTCCTTGTCTG 2088202 >seq5 Length=7653734 Score = 111 bits (122), Expect = 1e-19 Identities = 136/182 (75%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || || |||||||| ||||||| ||||| |||||||||||| ||||| ||| |||| Sbjct 6493471 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 6493530 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTTTTTGT-TTAACCTGTT 118668 |||||||| || || || || ||||||||||||| ||| | | || || || || | | Sbjct 6493531 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGA--TCTTGGTCTTGACGTTGT 6493588 Query 118669 CGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728 ||| |||||| | |||||| |||| ||| | || || || ||||| || || || | Sbjct 6493589 CGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 6493648 Query 118729 AA 118730 || Sbjct 6493649 AA 6493650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830362988844