Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F000952775.2_202016-05-01] 7 sequences; 35,233,101 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq4 95.1 3e-14 seq2 84.2 5e-11 >seq4 Length=5791255 Score = 95.1 bits (104), Expect = 3e-14 Identities = 130/180 (72%), Gaps = 4/180 (2%) Strand=Plus/Plus Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261 || || || |||||| || | ||||| |||||||| |||| ||||||| ||||| ||| Sbjct 2194706 TGCCCACCATTCAAGATCATCATCCTCGACGAGGCAGACAGCATGACGCAAGACGCACAG 2194765 Query 254262 TCCGCCCTCCGCCGAACGATGGAGAC--GCACTCCGTTGTGACGCGTTTTTGCCTGGTGT 254319 ||||| || ||||| ||||||||||| || || | | ||||| || || || || | Sbjct 2194766 TCCGCTCTGCGCCGCACGATGGAGACATACAGTCGG--ATCACGCGGTTCTGTCTTGTCT 2194823 Query 254320 GCAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 | || || || || || |||| ||||| ||| ||| ||| ||| || || |||| Sbjct 2194824 GTAATTATGTCACGCGCATTATCGAGCCGCTCGCTAGTCGATGCAGCAAATTCCGCTTCA 2194883 >seq2 Length=4277548 Score = 84.2 bits (92), Expect = 5e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 249277 TTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAG 249336 || ||||| || |||| ||||||||||||| | || |||||||| || || ||| Sbjct 56466 TTTGCCATCTACCTGGAGCCGTGGCACGCCGATGTCTTCGAGTTCCTCGATCTGCGGAAG 56407 Query 249337 AACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGAC 249396 ||| |||| || ||| | | || |||||||||||||||| ||||| | |||| Sbjct 56406 AACCACGGTAAGGAGGAGGTTCGTGCTCGTGACCTCTTCTACGCTTTGTGGACCCCCGAT 56347 Query 249397 TTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCT 249437 | |||||| || || ||||| |||| || ||||| || Sbjct 56346 CTCTTCATGAAGCGTGTTGAGGCCAACGGTGACTGGACCCT 56306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073766303696576