Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F000952775.2_202016-05-01] 7 sequences; 35,233,101 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq1 114 1e-20 seq5 102 6e-17 >seq1 Length=11921518 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 |||||| | || | || |||| ||| || ||| |||||||||||| ||||| || Sbjct 6335705 GCCACCACGCAGACGCAACACCAGGTGAAGAGTGGACTCCTTCTGAATATTGTAATCCGA 6335764 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || ||| |||| ||||| || || || ||||| || | ||||| ||||| ||||| Sbjct 6335765 AAGAGTGCGCCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGG 6335824 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | ||||||||||||| || || ||| || | | | |||| | ||| || Sbjct 6335825 AATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCAATGGTGTCTGAGCTCTCAAC 6335884 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||| | ||||| ||||| || |||| |||||| |||||||||||||| Sbjct 6335885 CTCGAGCGTAATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 6335932 Score = 102 bits (112), Expect = 6e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| |||||||||||| ||||||||| || || | || || ||||| Sbjct 6335957 GTGGAGCGTTGACTCCTTCTGAATATTGTAGTCGGAAAGAGTACGGCCATCTTCAAGTTG 6336016 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| || | ||||| ||||| ||||| | ||||||||||||| || || Sbjct 6336017 CTTGCCTGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTT 6336076 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| | ||| ||||| | || || ||||| || || Sbjct 6336077 GCTCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCGAGCGTGATAGTCTTTCCGGT 6336136 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || |||||| |||||||||||||| Sbjct 6336137 CAAAGTCTTGACAAAGATTTGCAT 6336160 >seq5 Length=7653734 Score = 102 bits (112), Expect = 6e-17 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 45147 CCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATA 45206 ||||||| |||||||||||| |||| ||| | || || || || ||||||||||| | Sbjct 6493469 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 6493528 Query 45207 TCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCG 45266 ||| ||||||||||| || || | |||||||||||| || || ||| || Sbjct 6493529 TCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 6493588 Query 45267 CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAA 45326 | | | |||| | ||| || || | |||||| ||||| |||||||| ||||| || | Sbjct 6493589 CGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 6493648 Query 45327 A 45327 | Sbjct 6493649 A 6493649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395075166295147