Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F000952775.2_202016-05-01] 7 sequences; 35,233,101 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1 114 3e-20 seq2 98.7 2e-15 >seq1 Length=11921518 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || | ||| | || || || || | || || || ||||||||||| ||||| Sbjct 6336159 ATACCACCACGTAGACGGAGGACGAGGTGGAGCGTTGACTCCTTCTGAATATTGTAGTCG 6336218 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || ||||| | ||| ||||| || || || || || || || || | ||| || || ||| Sbjct 6336219 GAAAGAGTACGACCATCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGA 6336278 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || || ||||| |||||||| | || ||||| || | |||||||| | || Sbjct 6336279 GGGATGCCCTCCTTATCTTGAATCTTGGACTTCACATTATCGATAGTATCGCTGGACTCG 6336338 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 ||||| || || || || || ||||| || || || || Sbjct 6336339 ACCTCAAGGGTGATGGTTTTTCCAGTCAGGGTCTTGAC 6336376 Score = 107 bits (118), Expect = 4e-18 Identities = 166/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || | ||| | || || || || | || || || ||||||||||| ||||| Sbjct 6335931 ATACCACCACGTAGACGGAGGACGAGGTGGAGCGTTGACTCCTTCTGAATATTGTAGTCG 6335990 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || ||||| | || ||||| ||||| || || || || || || | ||| || |||||| Sbjct 6335991 GAAAGAGTACGGCCATCTTCAAGTTGCTTGCCTGCGAAGATAAGACGCTGCTGGTCAGGA 6336050 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGT-T 104507 || || || || || ||||| ||| ||||| || || || || | ||| || || | | Sbjct 6336051 GGAATACCCTCCTTGTCCTGGATC-TTGCTCTTGACGTTGTCAATGGTGTC-TGAGCTCT 6336108 Query 104508 CTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | ||||| || || |||||||| || || | || || ||||| || ||||| Sbjct 6336109 CAACCTCGAGCGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 6336160 Score = 105 bits (116), Expect = 2e-17 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||||||||| || || || ||||| | ||||| || || || || ||| Sbjct 6335736 GTGGACTCCTTCTGAATATTGTAATCCGAAAGAGTGCGCCCGTCCTCCAGCTGCTTACCA 6335795 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481 || || || || | ||| || |||||||| || || || || ||||| ||| ||||| || Sbjct 6335796 GCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATC-TTGCTCTT 6335854 Query 104482 TACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTG 104540 || || || | ||| || || | || ||||| || ||||||||||| || || | | Sbjct 6335855 GACGTTGTCAATGGTGTC-TGAGCTCTCAACCTCGAGCGTAATAGTCTTTCCGGTCAAAG 6335913 Query 104541 TTTTTACAAATATCTGCAT 104559 | || ||||| || ||||| Sbjct 6335914 TCTTGACAAAGATTTGCAT 6335932 >seq2 Length=4277548 Score = 98.7 bits (108), Expect = 2e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197 ||||| ||||||||||| || ||||| ||||| || || || || ||| | ||||| ||| Sbjct 2617028 GTTGCCTTTGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTCCATCTTCTGG 2616969 Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257 ||||||| | ||||| ||||| || | |||||||| ||||| |||| | || Sbjct 2616968 CTGAAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGATCTCTCGTGAT 2616909 Query 269258 GAAGGTTTACACTGCGACTTCGCTTGT 269284 || ||| | ||| |||||||||||| Sbjct 2616908 GAGGGTCTCCACACTGACTTCGCTTGT 2616882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151398296733956