Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F000952775.2_202016-05-01] 7 sequences; 35,233,101 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1 118 9e-22 seq5 84.2 2e-11 >seq1 Length=11921518 Score = 118 bits (130), Expect = 9e-22 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| |||||||||||||| || | ||||| |||| || ||| || Sbjct 6336160 ATGCAAATCTTTGTCAAGACTTTGACCGGAAAGACTATCACGCTCGAGGTTGAGAGCTCA 6336101 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || | ||| || ||| ||||| || || ||||| |||||||| Sbjct 6336100 GACACCATTGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAG 6336041 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| || || ||||| ||| | ||||||| || ||| | ||| |||||| Sbjct 6336040 CAGCGTCTTATCTTCGCAGGCAAGCAACTTGAAGATGGCCGTACTCTTTCCGACTACAAT 6335981 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 ||||| || || || ||||| || Sbjct 6335980 ATTCAGAAGGAGTCAACGCTCCA 6335958 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| |||||||||||||| || | || || |||| || ||| || Sbjct 6335932 ATGCAAATCTTTGTCAAGACTTTGACCGGAAAGACTATTACGCTCGAGGTTGAGAGCTCA 6335873 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || | ||| || ||| ||||| || || ||||| |||||||| Sbjct 6335872 GACACCATTGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAG 6335813 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| || || || || || | || || | |||||| | ||||||||| Sbjct 6335812 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGGCGCACTCTTTCGGATTACAAT 6335753 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 ||||| || || ||||| || || Sbjct 6335752 ATTCAGAAGGAGTCCACTCTTCA 6335730 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 25011 GTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAG 25070 || ||||| |||| || ||| ||||||| | || || ||||| || |||||||| Sbjct 6336376 GTCAAGACCCTGACTGGAAAAACCATCACCCTTGAGGTCGAGTCCAGCGATACTATCGAT 6336317 Query 25071 TCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTAT 25129 ||||| | || | ||| || || || || || || || ||||| ||||| | || Sbjct 6336316 AATGTGAAGTCCAAGATTCAA-GATAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTCAT 6336258 Query 25130 TTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGA 25189 || || ||||| || | ||||||| ||| ||| | ||| ||||||||||| || || Sbjct 6336257 CTTCGCAGGCAAGCAGCTTGAAGATGGTCGTACTCTTTCCGACTACAATATTCAGAAGGA 6336198 Query 25190 ATCCACGCTACA 25201 || ||||| || Sbjct 6336197 GTCAACGCTCCA 6336186 >seq5 Length=7653734 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || ||||| |||| ||||| |||| || |||| || |||||| ||||| ||| Sbjct 6493649 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 6493590 Query 25068 GAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATT 25127 || | ||| || ||| ||||| || || ||||| |||||||||||||| | Sbjct 6493589 GACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCGTCTG 6493530 Query 25128 ATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186 || || ||||| || || | || |||| ||||| || |||| ||||| || || || Sbjct 6493529 ATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 6493471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327963031705