Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F000952775.2_202016-05-01] 7 sequences; 35,233,101 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1 116 3e-21 seq5 86.0 5e-12 >seq1 Length=11921518 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || ||||| ||||| || || | || || || || || | | | Sbjct 6335932 ATGCAAATCTTTGTCAAGACTTTGACCGGAAAGACTATTACGCTCGAGGTTGAGAGCTCA 6335873 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || || ||||||||||||||||| || || || Sbjct 6335872 GACACCATTGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAG 6335813 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| || || || || ||| | ||||| ||||| | || |||||||| Sbjct 6335812 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGGCGCACTCTTTCGGATTACAAT 6335753 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| || || ||||| | || | || ||||| |||| || || Sbjct 6335752 ATTCAGAAGGAGTCCACTCTTCACCTGGTGTTGCGTCTGCGTGGTGG 6335706 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || ||||| ||||| || || |||| || || || || | | | Sbjct 6336160 ATGCAAATCTTTGTCAAGACTTTGACCGGAAAGACTATCACGCTCGAGGTTGAGAGCTCA 6336101 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || || ||||||||||||||||| || || || Sbjct 6336100 GACACCATTGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAG 6336041 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| || || ||||| || | || ||| ||| || | ||||| ||||| Sbjct 6336040 CAGCGTCTTATCTTCGCAGGCAAGCAACTTGAAGATGGCCGTACTCTTTCCGACTACAAT 6335981 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || || || || Sbjct 6335980 ATTCAGAAGGAGTCAAC 6335964 Score = 100 bits (110), Expect = 2e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| ||||| || || ||| |||||| | ||| | |||| Sbjct 6336650 ACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCGACAACGTCAAGTCG 6336591 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || || |||||||| || || || || || || || | || ||||||||||| Sbjct 6336590 AAGATCCAGGATAAGGAGGGCATCCCTCCTGACCAGCAGCGCTTGATCTTTGCCGGCAAG 6336531 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | |||||| ||||||| |||||||||| |||||||| || || || || Sbjct 6336530 CAGCTTGAGGATGGCCGCACCCTCTCCGATTATAACATTCAGAAGGAGTCTAC 6336478 Score = 93.3 bits (102), Expect = 4e-14 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370 |||||||||||||||||| || || ||||| || || || || |||||||| ||| | || Sbjct 2088203 AGACAAGGAGGGTATTCCCCCTGACCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGA 2088262 Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 |||| |||||| | || ||||||||||| || || || || ||| Sbjct 2088263 GGATGGCCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCGACC 2088308 >seq5 Length=7653734 Score = 86.0 bits (94), Expect = 5e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| || || || | || ||||| || | || || || || || | | ||| ||| | Sbjct 6493650 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCAT 6493591 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| | |||| || || || ||||||||||| ||||| || || ||||| ||||| Sbjct 6493590 CGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCGTCT 6493531 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || || ||||| || ||| | |||||| ||||||| | ||| |||||||| || || Sbjct 6493530 GATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 6493471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727964191955