Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F000952775.2_202016-05-01] 7 sequences; 35,233,101 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2 141 9e-29 seq5 102 8e-17 >seq2 Length=4277548 Score = 141 bits (156), Expect = 9e-29 Identities = 352/527 (67%), Gaps = 33/527 (6%) Strand=Plus/Minus Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG-- 52383 || || ||| || ||| ||||| | ||||| | ||||||||| | |||| || Sbjct 2617106 GTTCCCTGCATTGCCAAGAAGGCCAACTGGGCCCTTAAGTGGATCAA---CGACCGCGAG 2617050 Query 52384 -CCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGC 52442 | || | || ||| |||| ||||| ||| |||||||| | || || || ||| Sbjct 2617049 TCAACCTTCGCTTCGCGTCTGGTTGCCTTTGCCGCTGTCGAGGGTATCTTCTTCTCTGGC 2616990 Query 52443 AGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGC 52502 || ||| ||||||| | | || | | ||| | ||||| || || || ||| | Sbjct 2616989 TCATTCGCCTCCATCTTCTGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCC 2616930 Query 52503 AACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT------CTAC 52556 |||||| |||| || || || || || || ||||| ||||| || || || || | Sbjct 2616929 AACGAGCTGATCTCTCGTGATGAGGGTCTCCACACTGACTTCGCTTGTCTGCTGTTCTCC 2616870 Query 52557 TACAAGA-----CGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCA 52611 ||| || ||| | |||| || || | || || || | ||| || Sbjct 2616869 CACATGAACCACCGCCCC-GACCCCAAGATGG--TT-------GAGGCT-ATCATCGTC- 2616822 Query 52612 AGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGG 52671 ||||| || | ||||| ||||||| | || | ||| || || | ||||| | Sbjct 2616821 --GAGGCCGTCGGCATCGAGCAGGAGTTCCTGACTGACGCTCTTCCCTGTGGTCTGCTTG 2616764 Query 52672 GCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGC 52731 |||||||| | || |||||||||||||| ||||| || || || || ||||||||| Sbjct 2616763 GCATGAACTCCAAGCTGATGTGCGAGTACATTGAGTTCGTCGCTGACCGCCTGTTGGTGG 2616704 Query 52732 AGCTCGGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATT 52790 ||||| || | | ||||||| ||||||| ||| || || || || ||| | ||| Sbjct 2616703 CCCTCGG-CAACAAGAAGTACTACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATC 2616645 Query 52791 TCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 || || | |||||||||||||| ||||||||||| ||||| || || Sbjct 2616644 TCCCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTA 2616598 >seq5 Length=7653734 Score = 102 bits (112), Expect = 8e-17 Identities = 135/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| || || |||||||| || || |||| ||| Sbjct 6493469 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 6493528 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542 | |||||||||||||| || || || || || ||||| || | || || || | ||| Sbjct 6493529 TCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTC-CTGGATCTTGGTCTTGACGTTG 6493587 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| ||||||| || |||| || | || ||||| ||||| || || || Sbjct 6493588 -TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 6493646 Query 138603 AAAA 138606 ||| Sbjct 6493647 GAAA 6493650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262356577040