Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F000952775.2_202016-05-01] 7 sequences; 35,233,101 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1 129 6e-25 seq5 104 2e-17 >seq1 Length=11921518 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||||||||| || | || ||||| || |||||||||||||| Sbjct 6335706 CCACCACGCAGACGCAACACCAGGTGAAGAGTGGACTCCTTCTGAATATTGTAATCCGAA 6335765 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || ||||| || |||||| |||| | |||||||| || ||||| Sbjct 6335766 AGAGTGCGCCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 6335825 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| ||| || ||||| |||| || | |||||| | ||||| || Sbjct 6335826 ATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTG-TCAATGGTGTCTGAGCTCTCAAC 6335884 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || || ||||||| ||| || ||||| || ||||| Sbjct 6335885 CTCGAGCGTAATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 6335932 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| |||| || | || | || | ||| ||||| || ||||||||||| ||| Sbjct 6335934 CCACCACGTAGACGGAGGACGAGGTGGAGCGTTGACTCCTTCTGAATATTGTAGTCGGAA 6335993 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || || || || || ||| |||| | |||||||| || ||||| Sbjct 6335994 AGAGTACGGCCATCTTCAAGTTGCTTGCCTGCGAAGATAAGACGCTGCTGGTCAGGAGGA 6336053 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| ||| || ||||| |||| || | |||||| | ||||| || Sbjct 6336054 ATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTG-TCAATGGTGTCTGAGCTCTCAAC 6336112 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || || ||||||| ||| || ||||| || ||||| Sbjct 6336113 CTCGAGCGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 6336160 Score = 91.5 bits (100), Expect = 1e-13 Identities = 97/127 (76%), Gaps = 1/127 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || ||||| || |||||| | ||||| ||| || ||||| || || Sbjct 6336478 GTAGACTCCTTCTGAATGTTATAATCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCG 6336537 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || ||||||| |||||||| || ||||| ||||||||||| ||| ||| ||| |||| Sbjct 6336538 GCAAAGATCAAGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATCTTCGACTTG 6336597 Query 127037 A-GTTGT 127042 | ||||| Sbjct 6336598 ACGTTGT 6336604 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| |||| || | || | || | ||| ||||| || ||||||||||| ||| Sbjct 6336162 CCACCACGTAGACGGAGGACGAGGTGGAGCGTTGACTCCTTCTGAATATTGTAGTCGGAA 6336221 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || ||||| || || ||| |||| | |||||||| |||||||| Sbjct 6336222 AGAGTACGACCATCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGAGGG 6336281 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||| || || || ||| | | |||| || || | |||||| Sbjct 6336282 ATGCCCTCCTTATCTTGAATCTTGGACTTCACATTATCGATAGTATCGCTGGACTCGACC 6336341 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 || | ||| | ||||| || ||||| || || || Sbjct 6336342 TCAAGGGTGATGGTTTTTCCAGTCAGGGTCTTGAC 6336376 >seq5 Length=7653734 Score = 104 bits (114), Expect = 2e-17 Identities = 133/181 (73%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| |||| || ||||| ||| || ||||| ||||| ||| ||||| Sbjct 6493471 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 6493530 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044 | ||||| || || || || ||||||||||||||| ||| || ||||| |||| || Sbjct 6493531 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTG-TC 6493589 Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 || |||||| | |||||| |||| ||| | || || || ||||| || || || || Sbjct 6493590 GATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 6493649 Query 127105 A 127105 | Sbjct 6493650 A 6493650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500758393680