Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F000952775.2_202016-05-01] 7 sequences; 35,233,101 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1 105 4e-17 >seq1 Length=11921518 Score = 105 bits (116), Expect = 4e-17 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| || || || || || || || || ||| || || | ||||| Sbjct 6335939 ACGTAGACGGAGGACGAGGTGGAGCGTTGACTCCTTCTGAATATTGTAGTCGGAAAGAGT 6335998 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||||||||||||||| || || || |||||||| || || ||||||||||| || Sbjct 6335999 ACGGCCATCTTCAAGTTGCTTGCCTGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACC 6336058 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 |||||||| || ||||| ||||| ||||| || || | | | | || || | Sbjct 6336059 CTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCAATGGTGTCTGAGCTCTCAA-CCTCGA 6336117 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || ||||| || ||||| | |||||| || || ||||| Sbjct 6336118 GCGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTG 6336157 Score = 93.3 bits (102), Expect = 3e-13 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| | || || ||||| || || || || ||| ||||| | ||||| Sbjct 6335711 ACGCAGACGCAACACCAGGTGAAGAGTGGACTCCTTCTGAATATTGTAATCCGAAAGAGT 6335770 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | || || || ||||| ||||| || |||||||| || || ||||||||||| || Sbjct 6335771 GCGCCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACC 6335830 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 |||||||| || ||||| ||||| ||||| || || | | | | || || | Sbjct 6335831 CTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCAATGGTGTCTGAGCTCTCAA-CCTCGA 6335889 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | |||||||| || ||||| | |||||| || || ||||| Sbjct 6335890 GCGTAATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTG 6335929 Score = 86.0 bits (94), Expect = 4e-11 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| || || || || || || || || ||| || || | ||||| Sbjct 6336167 ACGTAGACGGAGGACGAGGTGGAGCGTTGACTCCTTCTGAATATTGTAGTCGGAAAGAGT 6336226 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||||||||| ||||| || || || || ||||| || || || ||||| || || Sbjct 6336227 ACGACCATCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCC 6336286 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 ||||| ||||||||||| || ||| || |||||||| || ||||| Sbjct 6336287 CTCCTTATCTTGAATCTTGGACTTCACATTATCGATAGTATCGCTGGACTCGACCTCAAG 6336346 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGA 480762 ||| || ||||| || || || ||||| |||| Sbjct 6336347 GGTGATGGTTTTTCCAGTCAGGGTCTTGACGA 6336378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268178899736036