Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F000952775.2_202016-05-01] 7 sequences; 35,233,101 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq2 138 1e-26 seq4 114 2e-19 seq1 104 3e-16 seq5 95.1 1e-13 >seq2 Length=4277548 Score = 138 bits (152), Expect = 1e-26 Identities = 178/243 (73%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| | || ||||| Sbjct 2616589 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATG 2616648 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||||| | ||| ||||||| | ||||||| ||| | | ||||| | | | Sbjct 2616649 GACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACC 2616708 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 | ||||||||| ||||| ||||| ||||||| |||||| || || ||||||||| | Sbjct 2616709 AACAGGCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGAGTTCATGCCAAGC 2616768 Query 868871 AGCGCCAC-CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGAT 868929 || |||| || || | || ||| ||||| | |||||| |||||||||||||||| Sbjct 2616769 AG-ACCACAGGGAAGAGCGTCAGTCAGGAACTCCTGCTCGATGCCGACGGCCTCGACGAT 2616827 Query 868930 GAT 868932 ||| Sbjct 2616828 GAT 2616830 Score = 131 bits (144), Expect = 2e-24 Identities = 288/435 (66%), Gaps = 8/435 (2%) Strand=Plus/Plus Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGGC-CGACGTCGTCGTACCCAGGTTCTGCTGGTTG 1628220 ||| ||||||||| ||||||||||||| | || | ||||||||||||| |||||| Sbjct 56052 ACTCGACGATCTCAGTGCACAGGTTGGAGCTGCGAA-TAGTACCCAGGTTCTTCTGGTTA 56110 Query 1628221 GTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCC 1628280 | || |||| || ||||||| ||||||| |||| || |||||| |||| ||| Sbjct 56111 CTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCC 56170 Query 1628281 GCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCC-GCG--CGCGGCCCTNN 1628337 | | ||||| |||||| || | || | || ||| ||| | ||||||| Sbjct 56171 TCAAGAATGGCGTACCAGAGCTTCTGAGC---CTTGATGGTCTTGCGGCCACGGCCCTCC 56227 Query 1628338 NNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGC 1628397 || || | | |||||| || ||| ||||| Sbjct 56228 TGCTCGTACTTCGCGTAGAGAGCATCGAACTCATCACCGTAGACATCAGCCAGACCGGGG 56287 Query 1628398 GCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGG 1628457 |||||| || || ||||| | |||||| || || | | | || ||| ||||| Sbjct 56288 GCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGA 56347 Query 1628458 TCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTC 1628517 || ||||||| ||||| |||||||| || || || ||||||||| ||||||||| Sbjct 56348 TCGGGGGTCCACAAAGCGTAGAAGAGGTCACGAGCACGAACCTCCTCCTTACCGTGGTTC 56407 Query 1628518 TTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAG 1628577 || || ||||| | |||| | |||||||||||||||||||||||| |||||| Sbjct 56408 TTCCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAT 56467 Query 1628578 GCGCCCTTGCGCTTG 1628592 || || ||||||| Sbjct 56468 GCACCAGGGCGCTTG 56482 Score = 118 bits (130), Expect = 1e-20 Identities = 178/251 (71%), Gaps = 3/251 (1%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||| ||||| || ||||||||||||||| ||| | |||| | | ||| Sbjct 2617243 GAGTGGATATTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGGGCCTCGGGGATCTGG 2617302 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| |||| || || | ||||||||| || ||||||||| |||||| || Sbjct 2617303 ACCTCGGAACTGAAACGCTCGACAAGGTTCTCGTTGACAATGCCGTCGGAGGCGGCAAAG 2617362 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTGG 869809 |||||||||||||| ||| |||| ||||| |||||| | | ||| ||||| | Sbjct 2617363 AAAGCCAGGACGTGGGAGATGAAGTAACGCTCATCGTCGTTCAGGCGGTTGTGCCAGTCG 2617422 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 | || | ||| || | ||| ||||| ||||||| ||||| |||||||| ||| Sbjct 2617423 TGGAGATCCTTGGAGAGATCAATCTCTTCGGCAGTCCAGAAAGAGGCTTCGGCCTTCTTG 2617482 Query 869870 TACATCTCCCA 869880 ||||| | ||| Sbjct 2617483 TACATTTGCCA 2617493 Score = 107 bits (118), Expect = 2e-17 Identities = 141/195 (72%), Gaps = 9/195 (5%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| || || ||| ||||| |||||| || | ||| || ||||| ||||| ||||| Sbjct 2616903 ACCCTCATCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCAGGCATCAGGCCACGCTT 2616962 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||| ||||| ||||||| | ||| ||| ||||| ||||| |||||||| |||||||| Sbjct 2616963 CTTCAGCCAGAAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCCTCGACAGCGGCAAA 2617022 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTG---TCGAGGCCCTCCTTGTTGATCCACTTCATCGC 869355 | | | || ||| || ||||| ||| || | |||||||||||| | || Sbjct 2617023 GGCAACCAGACGCGAAGCGAAGGTTGACTCGCGGTC------GTTGATCCACTTAAGGGC 2617076 Query 869356 CCAGTCGGCCTTTTT 869370 ||||| |||||| || Sbjct 2617077 CCAGTTGGCCTTCTT 2617091 >seq4 Length=5791255 Score = 114 bits (126), Expect = 2e-19 Identities = 92/111 (83%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 |||||||||||| | || || ||| |||| ||||| | || |||||| | || || ||| Sbjct 5113251 GCCGCCAACTACTTGGATATTAAGGCTCTCCTCGACGTCGGCTGCAAGACCGTCGCTAAC 5113192 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||||||||||||||| || ||||||||||| |||||||| |||||| || Sbjct 5113191 ATGATCAAGGGCAAGTCCCCAGAGGAGATCCGTAAGACCTTCAACATCCAG 5113141 >seq1 Length=11921518 Score = 104 bits (114), Expect = 3e-16 Identities = 118/157 (75%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||| || || || || || ||| || |||||||| | ||||| |||||| Sbjct 9725419 GACAGCATCGGTGGAACCGTAACATGTGTGATCCGGAACGTGCCAGTTGGCCTTGGCGAG 9725360 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| || ||| | || || ||||| |||||| ||||| ||||| || ||| Sbjct 9725359 CCCTGCTTCGATAAGCTTGAAGCTAAGCTCGGCCACGCGATGCTCAGCATCCCCGCAACC 9725300 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202 ||||| |||||||| ||| ||| || |||| |||| Sbjct 9725299 AAGGGCTTCGAGATCGGCTCCGGTTTCGGCGGCTGCG 9725263 Score = 100 bits (110), Expect = 3e-15 Identities = 215/319 (67%), Gaps = 8/319 (3%) Strand=Plus/Minus Query 18099 TGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCC 18158 ||||||||| ||| | ||||||||| ||| ||||||| || || || | Sbjct 9726105 TGGCGAGTCCCACTGTCGCTCCGTCGGCTGTATCGTCGACGGATGTCCTCCAGGCCTAGA 9726046 Query 18159 ACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACT 18218 ||| | |||||||||||||||||||| || |||||||| || ||||| |||| || Sbjct 9726045 ACTCACTGAGGCCGACATCCAGCCTCAAATGACCCGGCGCCGTCCCGGCCAAAGCGCCCT 9725986 Query 18219 TTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCT 18278 | | || ||||| ||||| || || ||| |||||||| ||||| ||| |||| | Sbjct 9725985 TACTACCCCGCGAGACGAGAAGGACCGAGTCGAGATCCAGTCAGGCACAGAGTTCGGCAT 9725926 Query 18279 CACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTA 18338 ||| || ||| | || | | | | | || ||| |||||||| || ||||| Sbjct 9725925 CACTCTGGGCACACCAATTGCCATGGTCGTCCGCAATGAGGACCAGCGTCCTAAGGACTA 9725866 Query 18339 TTCCGACATGTGCAAGG------TGCCGCGGCCCT-CACACGCCGACTACACCTACATGG 18391 | ||| | ||| | | || | ||||| || ||||||| ||||||| | | Sbjct 9725865 CGGCAACA-GCACAATGGACCTATACCCCCGCCCTAGCCATGCCGACTTCACCTACCTTG 9725807 Query 18392 CCAAGTACGGCATCAAGGC 18410 |||||||| ||||||| Sbjct 9725806 AGAAGTACGGTGTCAAGGC 9725788 >seq5 Length=7653734 Score = 95.1 bits (104), Expect = 1e-13 Identities = 248/370 (67%), Gaps = 19/370 (5%) Strand=Plus/Minus Query 1726685 TGCGGCTGGGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCCACGCTCCCGTCGGTGCCG 1726744 || || || | |||||||| | |||||| | || | || | | |||||||||||| Sbjct 4284073 TGGGGGTGCGAGGCGGCGCCGATGGCGTCCACGGCGACGGTCAAGTTACCGTCGGTGCCG 4284014 Query 1726745 TTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCG 1726804 |||||| ||||||||| | | ||| |||| || | ||||||||| | ||| |||| Sbjct 4284013 TTCTTGTAGCCGATGGGGAAGGACAGGCCCGAGGCGAGCTCGCGGTGAAGCTGAGACTCG 4283954 Query 1726805 GTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCA---AATAAGGGGCCACC 1726861 || ||||| ||||| | |||||| | | ||||||||||| | | ||||| Sbjct 4283953 GTGGTGCGGGCGCCGATCGCGCCCAGAGAGATCAGGTCTGCCAGGTACTGAGGGG----- 4283899 Query 1726862 AGA-GGACT-GAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCGCA 1726919 ||| || | ||| | |||| ||| | ||| | || ||| | | || ||| Sbjct 4283898 AGATGGTGTCGAGCATCTCGGAGGCGATGGGGAG-TC--CGGTGCTGGTCAGGTCGGTGT 4283842 Query 1726920 ACAG---GCGGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGG 1726976 |||| ||| | ||||| ||| || | | | | | | | | |||||| |||| Sbjct 4283841 ACAGCTTACGG-GAGACGC--GCAGACCCTTGTTGATGTTGAAGGTCTCGTCGATATCGG 4283785 Query 1726977 GGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCA 1727036 | ||| || || |||||||| ||||| || ||||| ||||| || | ||||| |||| Sbjct 4283784 GATCGTTGATGAGTCCCTTCCAGCCGACCGTTGTGCGGGGCTTCTCCAGGTAGGCACGCA 4283725 Query 1727037 TGACCACGCA 1727046 ||| ||| || Sbjct 4283724 TGATCACACA 4283715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107138625547219