Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F000952775.2_202016-05-01] 7 sequences; 35,233,101 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq1 131 1e-25 >seq1 Length=11921518 Score = 131 bits (144), Expect = 1e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||||||||| || |||||| |||||| ||||| || ||||| ||||| || ||| Sbjct 6335715 AGACGCAACACCAGGTGAAGAGTGGACTCCTTCTGAATATTGTAATCCGAAAGAGTGCGC 6335774 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || || || ||||| || || || | |||||| ||||| || || | |||||| Sbjct 6335775 CCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCC 6335834 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||| || | || ||| | ||| |||||| |||||| || || | || Sbjct 6335835 TTGTCCTGGATC-TTGCTCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCGAGCGT 6335893 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| || || || ||||| || ||||| Sbjct 6335894 AATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 6335932 Score = 104 bits (114), Expect = 1e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| || |||||| ||||| || || || ||||| || || | ||||||||||| Sbjct 6335958 TGGAGCGTTGACTCCTTCTGAATATTGTAGTCGGAAAGAGTACGGCCATCTTCAAGTTGC 6336017 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || || || || || | |||||| ||||| || || | ||||||||||| |||| || Sbjct 6336018 TTGCCTGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATC-TT 6336076 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | || ||| | ||| |||||| |||||| || || | || || || || ||||| Sbjct 6336077 GCTCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCGAGCGTGATAGTCTTTCCGGT 6336136 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| || ||||| Sbjct 6336137 CAAAGTCTTGACAAAGATTTGCAT 6336160 Score = 84.2 bits (92), Expect = 1e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| || |||||| |||||||||||||| || || || || | || ||||| || Sbjct 6336472 TGGAGTGTAGACTCCTTCTGAATGTTATAATCGGAGAGGGTGCGGCCATCCTCAAGCTGC 6336531 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 || |||||||| || || ||||| ||||| || || | |||||||| || |||||| Sbjct 6336532 TTGCCGGCAAAGATCAAGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATCTT 6336590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729573149631