Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F000952775.2_202016-05-01] 7 sequences; 35,233,101 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1 158 3e-33 seq5 152 1e-31 seq2 91.5 3e-13 >seq1 Length=11921518 Score = 158 bits (174), Expect = 3e-33 Identities = 176/230 (77%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || || | ||| || || || || |||||||| | Sbjct 6335933 ACCACCACGTAGACGGAGGACGAGGTGGAGCGTTGACTCCTTCTGAATATTGTAGTCGGA 6335992 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || |||||||| || ||||| || || || ||||| | ||| || |||||| || Sbjct 6335993 AAGAGTACGGCCATCTTCAAGTTGCTTGCCTGCGAAGATAAGACGCTGCTGGTCAGGAGG 6336052 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCT-TCG 283049 ||||||||||||||| |||||| ||||| || ||| | || || ||||| | |||| || Sbjct 6336053 AATACCCTCCTTGTCCTGGATC-TTGCTCTTGACGTTGTCAATGGTGTCTG-AGCTCTCA 6336110 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| ||||| ||||| || ||||||||||| || || || ||||| Sbjct 6336111 ACCTCGAGCGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 6336160 Score = 147 bits (162), Expect = 5e-30 Identities = 173/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||| || | ||||| || | ||| || || || || ||||| || | | Sbjct 6335706 CCACCACGCAGACGCAACACCAGGTGAAGAGTGGACTCCTTCTGAATATTGTAATCCGAA 6335765 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| || ||||| || || || || || ||||| | ||| || |||||| ||| Sbjct 6335766 AGAGTGCGCCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 6335825 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCT-TCGA 283050 |||||||||||||| |||||| ||||| || ||| | || || ||||| | |||| || | Sbjct 6335826 ATACCCTCCTTGTCCTGGATC-TTGCTCTTGACGTTGTCAATGGTGTCTG-AGCTCTCAA 6335883 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | ||||| || || ||||| || ||||||||||| || || || ||||| Sbjct 6335884 CCTCGAGCGTAATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 6335932 Score = 123 bits (136), Expect = 5e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| |||||||| || || || | || || || || ||||| || || | Sbjct 6336448 CCACCACGGAGGCGAAGGACGAGGTGGAGTGTAGACTCCTTCTGAATGTTATAATCGGAG 6336507 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||||||||| || || || |||||||||||||| || || |||||| || Sbjct 6336508 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCAGGAGGG 6336567 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || |||||||| || |||||||| | || ||| | |||||||| || | || || Sbjct 6336568 ATGCCCTCCTTATCCTGGATCTTCGACTTGACGTTGTCGATAGTATCGCTGGACTCAACC 6336627 Query 283053 TCGAGAGTGATCGTCTTACCCGT 283075 || || ||||| ||||| || || Sbjct 6336628 TCAAGGGTGATGGTCTTGCCAGT 6336650 Score = 120 bits (132), Expect = 6e-22 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || || || || | || || || ||||||||||| || | Sbjct 2088338 ACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGA 2088279 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||||||||| || || || ||||| ||||||| || ||||||||| || Sbjct 2088278 AAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCAGGGGG 2088219 Query 282992 AATACCCTCCTTGTCT 283007 |||||||||||||||| Sbjct 2088218 AATACCCTCCTTGTCT 2088203 >seq5 Length=7653734 Score = 152 bits (168), Expect = 1e-31 Identities = 141/179 (79%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| || |||||||||||||| || || || ||||| |||||| Sbjct 6493471 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 6493530 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | ||| ||||||||| ||||| ||||||||||| |||||||| | || ||| | ||| Sbjct 6493531 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 6493590 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||| | ||||| ||||| || || ||||||||||||| ||||| ||||| Sbjct 6493591 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 6493649 >seq2 Length=4277548 Score = 91.5 bits (100), Expect = 3e-13 Identities = 152/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 230191 AGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250 |||||||| | |||||| |||| || |||| | |||||||| | | || ||| Sbjct 2616802 AGGAGTTCCTGACTGACGCTCTTCCCTGTGGTCTGCTTGGCATGAACTCCAAGCTGATGT 2616743 Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310 | | || || || ||||| ||||| || | || ||||| || || || |||| | Sbjct 2616742 GCGAGTACATTGAGTTCGTCGCTGACCGCCTGTTGGTGGCCCTCGGCAACAAGAAGTACT 2616683 Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370 | ||| | | |||||||||| || |||||| ||| || || || || || |||| Sbjct 2616682 ACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACT 2616623 Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 ||||||| ||||||||| | || || || | | | ||||| Sbjct 2616622 TCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCTGGTGT 2616583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046739106120578