Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F000952775.2_202016-05-01] 7 sequences; 35,233,101 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1 159 8e-34 seq5 114 3e-20 seq2 95.1 3e-14 >seq1 Length=11921518 Score = 159 bits (176), Expect = 8e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || ||| | || ||||| || ||||| |||||||| || ||||||||| Sbjct 6336157 CAAATCTTTGTCAAGACTTTGACCGGAAAGACTATCACGCTCGAGGTTGAGAGCTCAGAC 6336098 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||| |||||||| || || || ||||| |||||||| Sbjct 6336097 ACCATTGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAG 6336038 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || || || |||||||| | |||||| |||| || || | Sbjct 6336037 CGTCTTATCTTCGCAGGCAAGCAACTTGAAGATGGCCGTACTCTTTCCGACTACAATATT 6335978 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || ||||| || || || || Sbjct 6335977 CAGAAGGAGTCAACGCTCCACCTCGT 6335952 Score = 149 bits (164), Expect = 2e-30 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || ||| | || ||||| || || || |||||||| || ||||||||| Sbjct 6335929 CAAATCTTTGTCAAGACTTTGACCGGAAAGACTATTACGCTCGAGGTTGAGAGCTCAGAC 6335870 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||| |||||||| || || || ||||| |||||||| Sbjct 6335869 ACCATTGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAG 6335810 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || ||||| || || || | |||||| | ||||| || | Sbjct 6335809 CGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGGCGCACTCTTTCGGATTACAATATT 6335750 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || || || || || || || || || ||| Sbjct 6335749 CAGAAGGAGTCCACTCTTCACCTGGTGTTG 6335720 Score = 116 bits (128), Expect = 9e-21 Identities = 138/187 (74%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || || || |||||||| ||||| || | || || ||||| |||||||| Sbjct 6336652 TCACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCGACAACGTCAAGT 6336593 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 ||||| ||||| || || || |||||||| |||||||| || | ||||| ||||| | Sbjct 6336592 CGAAGATCCAGGATAAGGAGGGCATCCCTCCTGACCAGCAGCGCTTGATCTTTGCCGGCA 6336533 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | ||||| || ||||| | || || ||||||||||| | || || || || ||||| | Sbjct 6336532 AGCAGCTTGAGGATGGCCGCACCCTCTCCGATTATAACATTCAGAAGGAGTCTACACTCC 6336473 Query 178123 ATCTTGT 178129 | || || Sbjct 6336472 ACCTCGT 6336466 Score = 84.2 bits (92), Expect = 5e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| || || || || || ||||| || || || ||||||||||| || |||||||| Sbjct 2088204 GACAAGGAGGGTATTCCCCCTGACCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 2088263 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 ||||| | |||||| | ||||| ||| |||| || || || || || || || || Sbjct 2088264 GATGGCCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCGACCCTTCACCTCGT 2088319 >seq5 Length=7653734 Score = 114 bits (126), Expect = 3e-20 Identities = 136/183 (74%), Gaps = 6/183 (3%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 6493650 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGC---GACAC 6493594 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| |||||||| || || || || || ||||| || || Sbjct 6493593 CATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCG 6493534 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || |||||||||||||| |||||||| ||||| | || || ||| || ||| |||| Sbjct 6493533 TCTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 6493474 Query 178106 AAA 178108 || Sbjct 6493473 GAA 6493471 >seq2 Length=4277548 Score = 95.1 bits (104), Expect = 3e-14 Identities = 180/264 (68%), Gaps = 6/264 (2%) Strand=Plus/Plus Query 214128 GTTTTTCTGGTTGCTTTT---GCGGCAAATGGCATCTTTGTATGCGATGAAAGGCATTCC 214184 ||| |||||||| || || | |||| ||||| ||||| ||||| || | || Sbjct 56098 GTTCTTCTGGTTACTCTTCTTGTTGCAA---GCATCCTTGTAGAGCATGAAGGGGTTACC 56154 Query 214185 CACCTCGACTTGAGCGACAAGAATGTGATGCCAGAGTTCTTGGGCCTTCACGACCTTTTT 214244 |||| || || |||||||| | |||||| | || ||||| | | ||| Sbjct 56155 AGTCTCGGTCTGGGCCTCAAGAATGGCGTACCAGAGCTTCTGAGCCTTGATGGTCTTGCG 56214 Query 214245 GGCTCTTCCCTCGTTTTCGTACTTTTCATAAAGAGACTCAAATTCCGAACCGTAGACATC 214304 | | | ||||| | |||||||| | || |||| || || || |||||||||||| Sbjct 56215 GCCACGGCCCTCCTGCTCGTACTTCGCGTAGAGAGCATCGAACTCATCACCGTAGACATC 56274 Query 214305 ATCAAGACCGGGAGCCTCGTTGGGGCAGAAAAGACTCCATTGTCCATTATCCCTGACTCT 214364 | | |||||||| ||||||||||||||||| || |||| | || || || || | Sbjct 56275 AGCCAGACCGGGGGCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACG 56334 Query 214365 TTTCATGAAAAGGTCGGAAGTCCA 214388 |||||||| || |||| ||||| Sbjct 56335 CTTCATGAAGAGATCGGGGGTCCA 56358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203731092040358