Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F001750005.1_202016-09-29] 91 sequences; 31,778,960 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq4 114 1e-20 seq8 100 3e-16 >seq4 Length=3327763 Score = 114 bits (126), Expect = 1e-20 Identities = 162/221 (73%), Gaps = 10/221 (5%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||||||||| || | ||| |||||| || || || ||||| | ||||| || | Sbjct 2999461 ACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTATAATCCGAAAGAGTACGTCC 2999402 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || ||||||||||| ||||| || || ||||||||||| | || | | |||||| Sbjct 2999401 GTCCTCCAGCTGCTTACCGGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTT 2999342 Query 43088 GTCCATGATTTTTTGT-TTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACC 43142 |||| ||| | || | |||| ||| | | | ||||| |||| || || |||| | Sbjct 2999341 GTCC-TGAATCTTGCTCTTGA-CGTTGTCAATGGTGTCTGAGCTC---TCAACCTCGAGC 2999287 Query 43143 GTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || ||||| || || ||||| || || |||||||| Sbjct 2999286 GTGATAGTCTTGCCAGTGAGTGTCTTCACGAAAATTTGCAT 2999246 Score = 104 bits (114), Expect = 3e-17 Identities = 133/181 (73%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || ||||||||||||| || || || | || || |||||||| || ||||| Sbjct 2999209 CTCCTTCTGGATATTGTAATCAGAGAGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAA 2999150 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | || |||||||||| || | || | | | ||| Sbjct 2999149 GATGAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCC-TGGATCTTCGACTTAACGT 2999091 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | || ||||| || || || || | |||||||| || || || || ||||| | Sbjct 2999090 TGTCGATAGTATCGCTGGACTCGACCTCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGA 2999031 Query 43171 C 43171 | Sbjct 2999030 C 2999030 Score = 100 bits (110), Expect = 3e-16 Identities = 125/169 (74%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || ||||||||||||| || || || | || || |||||||| || ||||| Sbjct 2998920 CTCCTTCTGGATATTGTAATCAGAGAGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAA 2998861 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | || |||||||||| || | || | | | ||| Sbjct 2998860 GATGAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCC-TGGATCTTCGACTTAACGT 2998802 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 | | | || ||||| || || || || | |||||||| ||||| || Sbjct 2998801 TGTCGATGGTATCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCAGT 2998753 >seq8 Length=1853719 Score = 100 bits (110), Expect = 3e-16 Identities = 133/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| || ||| || || | || || |||||||| || ||||| | Sbjct 999063 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGA 999004 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | || ||||||||||| | || | || |||||||||| ||| || |||| ||| | Sbjct 999003 TCAGACGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 998945 Query 43114 CC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||||||||| || ||||||| || ||||| || ||||| || ||||| || Sbjct 998944 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 998885 Query 43173 AA 43174 || Sbjct 998884 AA 998883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571816949557480