Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F001750005.1_202016-09-29] 91 sequences; 31,778,960 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq1 104 5e-17 seq3 84.2 5e-11 >seq1 Length=5141995 Score = 104 bits (114), Expect = 5e-17 Identities = 132/180 (73%), Gaps = 4/180 (2%) Strand=Plus/Minus Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261 || || || |||||| || | ||||| |||||||| |||| ||||||| ||||| ||| Sbjct 2126303 TGCCCACCATTCAAGATCATCATCCTCGACGAGGCAGACAGCATGACGCAAGACGCACAG 2126244 Query 254262 TCCGCCCTCCGCCGAACGATGGAGAC--GCACTCCGTTGTGACGCGTTTTTGCCTGGTGT 254319 ||||| || || || ||||||||||| || || | | ||||| || || || || | Sbjct 2126243 TCCGCTCTGCGTCGCACGATGGAGACATACAGTCGG--ATCACGCGGTTCTGTCTTGTCT 2126186 Query 254320 GCAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 |||||||||| || || |||| ||||| || ||| ||| ||||| ||||||| Sbjct 2126185 GCAACTACGTCACGCGCATTATCGAGCCGCTCGCCAGTCGATGCAGTAAGTTCCGATTCA 2126126 >seq3 Length=4213559 Score = 84.2 bits (92), Expect = 5e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 249277 TTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAG 249336 || ||||| || |||| ||||||||||||| | || |||||||| ||| || ||| Sbjct 882150 TTTGCCATCTACCTGGAGCCGTGGCACGCCGATGTCTTCGAGTTCCTCGACCTGCGGAAG 882091 Query 249337 AACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGAC 249396 ||| |||| || ||| | | || |||||||||||||||| ||||| | |||| Sbjct 882090 AACCACGGTAAGGAGGAGGTTCGCGCTCGTGACCTCTTCTACGCTTTGTGGACCCCCGAT 882031 Query 249397 TTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCT 249437 | || ||| || || ||||| |||| || ||||| || Sbjct 882030 CTCTTTATGAAGCGTGTTGAGGCCAACGGTGACTGGACCCT 881990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073765148055488