Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F001750005.1_202016-09-29] 91 sequences; 31,778,960 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq3 129 7e-25 >seq3 Length=4213559 Score = 129 bits (142), Expect = 7e-25 Identities = 539/843 (64%), Gaps = 16/843 (2%) Strand=Plus/Plus Query 63248 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63307 ||| || |||| ||| || || |||||||||||||| || |||| | ||| || Sbjct 881995 CCAGTCACCGTTGGCCTCAACACGCTTCATAAAGAGATCGGGGGTCCACAAAGCGTAGAA 882054 Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367 || || | | | | ||||| || || ||||| || ||||||||| | | Sbjct 882055 GAGGTCACGAGCGCGAACCTCCTCCTTACCGTGGTTCTTCCGCAGGTCGAGGAACTCGAA 882114 Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427 | ||| | |||||||| |||| ||| ||||| | | ||||| || ||||| || || Sbjct 882115 GACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAATGCACCAGGGCGCTTGTTACCACC 882174 Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487 ||| || | || | |||||||| || | || | || ||| |||| ||||||||| || Sbjct 882175 CTGGTCGACATAACGTGCGGTGTTGTTGAACACACGCAGCATAGGAACAATACCGTTGGA 882234 Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATA--TTACTAATTGATAGA 63545 || ||||| || ||| || ||| | || |||||| | ||| ||| Sbjct 882235 GGAGCCGTTGGTTCCACCGATGTAAGAACCAGTAGCGCGAATACGGTGGACATT--CAGA 882292 Query 63546 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTGTCATAGATGCC 63604 || || || || || | |||||||| | || || || |||| || || || || || Sbjct 882293 CCGATACCACCAGCAGTCTTAGAGATCATGGCACA-GGTCTTAAGAGTATCGTAAATACC 882351 Query 63605 TTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGAC---ATTTGGTGACGAGT 63661 || ||||| || || | | || || || | ||| |||| | ||| | | | Sbjct 882352 CTCAATGCTGTCGGCGCTGACGTCAACCAGGA---AGCAAGACGCAAGCTGGGGCTGGGG 882408 Query 63662 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 63721 ||| | ||||| || || || || || ||||| || || | || | || | | | Sbjct 882409 AGTAGCGGCATTGAACAAAGTGGGGGAGGCGTGGGTGAAGTACTTCTGGGACATCAAGTG 882468 Query 63722 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 63781 ||| |||||||| || || |||||| || ||||| || || |||||||| | Sbjct 882469 GTATGTCTCAATGGCCTTCTCAATATCCTCGCCGTGGATTCCGACAGCAACACGCATCAG 882528 Query 63782 CATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63841 || ||||||||| | ||| ||| ||| ||| || | | ||| || || | Sbjct 882529 CAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATGCGAAGAAGGTATGAACGCTCGAG 882588 Query 63842 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAG 63901 || || || || || ||||||| ||||| || ||||| | ||| | || ||||| Sbjct 882589 GGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCGGAGTTGAG 882648 Query 63902 CTTATCCTTATATTTGTTAACTATATC--CATGGTAATACTTGAAATAATCGGAGAATGT 63959 || || || || |||| || || ||| | | |||| || || |||| | | Sbjct 882649 CTCCTCGGCATGCTTCATAACGATCTCGTAATGTTCCT--TTGAGATCATAGGAGCAGGC 882706 Query 63960 TTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttt 64019 || || || || || || |||| | | | ||| || || | ||| | ||| Sbjct 882707 TTATTGTTCTTGGGGTTCACGTAGTGGTACAGATCGGAGATGACCATAGAGAATTGCTTT 882766 Query 64020 tttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGA 64079 || |||| |||||| || || || | ||| || | || || ||||| || || || || Sbjct 882767 TTAGTTTGCTTGTGGAGGTTCGAAACGGCGATACGTGCAGCCAGAATAGCGTAGTCAGGG 882826 Query 64080 TGT 64082 ||| Sbjct 882827 TGT 882829 Score = 120 bits (132), Expect = 4e-22 Identities = 119/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632 |||| || ||| |||||||| ||| ||||||||||| | | || || || || || Sbjct 3368021 AACAGCAGACAGGCGAAATCTGTGTGGAGACCCTCGTCACGAGAGATCAACTCATTGGAG 3368080 Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692 || ||||| || ||||| ||||||||||| || ||||| || ||||| |||||||| || Sbjct 3368081 AAAGTGAGACCAGGCATAAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCA 3368140 Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33726 || |||||||| || || || || || ||||||| Sbjct 3368141 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAA 3368174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816883582480