Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F001750005.1_202016-09-29] 91 sequences; 31,778,960 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3 125 1e-23 >seq3 Length=4213559 Score = 125 bits (138), Expect = 1e-23 Identities = 290/433 (67%), Gaps = 17/433 (4%) Strand=Plus/Minus Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 ||||| || |||||||| || ||||| |||||||| || || || || ||||||| Sbjct 3368178 CTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTCCATCTTC 3368119 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 ||||| |||||||| || || ||||| || || || | || ||||| || ||||| Sbjct 3368118 TGGCTGAAGAAGCGTGGCCTTATGCCTGGTCTCACTTTCTCCAATGAGTTGATCTCTCGT 3368059 Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAG 125606 |||||||| || ||| || || ||| ||| ||||| | || || | || | Sbjct 3368058 GACGAGGGTCTCCACACAGATTTCGCCTGTCTGCTGTTCTCCCAC-ATGAACCACC---G 3368003 Query 125607 TGCAGATCCAGCGATGAAA-AGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACA 125665 | || || | || ||| |||| | ||| | ||||| | || || || Sbjct 3368002 CCCTGACCCTAAGGTGGTTGAGGCTATCATCGTTG------AGGCCGTCGGCATCGAGCA 3367949 Query 125666 AGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTG 125725 ||||| || || || | || || | || | |||||||||| |||||| ||||| Sbjct 3367948 GGAGTTCCTGACTGACGCTCTTCCCTGCGCTCTGCTCGGCATGAACTCCAAGCTGATGTG 3367889 Query 125726 CGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA---T 125782 ||||||||| ||||| || || || || || ||| | | | ||| ||||| Sbjct 3367888 CGAGTACATTGAGTTCGTCGCTGACCGCCTGCTG---GTGGCCCTCGGCAACAAGAAGTA 3367832 Query 125783 TTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAA 125842 |||||||| | || ||||| || |||||| ||| || || | || |||||||| Sbjct 3367831 CTACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAA 3367772 Query 125843 CTTTTTCGAGAAG 125855 ||| ||||||||| Sbjct 3367771 CTTCTTCGAGAAG 3367759 Score = 111 bits (122), Expect = 2e-19 Identities = 300/450 (67%), Gaps = 12/450 (3%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| || || || || || || || | ||| ||||| |||| || |||||||| || Sbjct 882177 CAGGGTGGTAACAAGCGCCCTGGTGCATTTGCCATCTACCTGGAGCCGTGGCACGCCGAT 882118 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || |||| |||| || ||| || || |||| || || | ||| Sbjct 882117 GTCTTCGAGTTCCTCGACCTGCGGAAGAACCACGGTAAGGAGGAGGTTCGCGCTCGTGAC 882058 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACG---ACGGTGGC 97052 | || || || | ||| || ||| | || |||||||| || | | |||||| Sbjct 882057 CTCTTCTACGCTTTGTGGACCCCCGATCTCTTTATGAAGCGTGTTGAGGCCAACGGTG-- 882000 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 |||||| ||| | |||||| || | | ||||||||| | ||| || || || || Sbjct 881999 -ACTGGACCCTCTTCTGCCCCAACGAGGCCCCCGGTCTGGCTGATGTCTACGGTGATGAA 881941 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATAC-GTGAGACGAGTCGATGC 97171 || || || ||| | |||||||| |||||||| | | |||| | || | || Sbjct 881940 TTCGATGCTCTCTACGTGAAGTACGAGCAGGAGGGCCGTGGCCGCAAGACCA-TCAAGGC 881882 Query 97172 ACGAGAA-CTGTGGAAGGCCAT-CGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATT 97229 | |||| || ||| | ||||| | ||| ||| ||| |||||||| | || | ||| Sbjct 881881 TC-AGAAGCTCTGGTACGCCATTCTTGA-GGCCCAGACCGAGACTGGTAACCCCTTCATG 881824 Query 97230 CTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGC 97289 |||||||||||| | || || || ||||| || |||| || || || Sbjct 881823 CTCTACAAGGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGGTACTATTCGCAGC 881764 Query 97290 TCCAATCTGTGCACGGAAATTGTAGAGTAC 97319 ||||| |||||||| || ||||| |||||| Sbjct 881763 TCCAACCTGTGCACTGAGATTGTCGAGTAC 881734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058357045160