Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F001750005.1_202016-09-29] 91 sequences; 31,778,960 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq4 105 2e-17 seq3 95.1 3e-14 >seq4 Length=3327763 Score = 105 bits (116), Expect = 2e-17 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || ||||| || || ||||| | ||||| || || || || || Sbjct 2999442 GTGGACTCCTTCTGGATGTTATAATCCGAAAGAGTACGTCCGTCCTCCAGCTGCTTACCG 2999383 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481 || || || || | ||| || |||||||| || || || || ||||||||| ||||| || Sbjct 2999382 GCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAATC-TTGCTCTT 2999324 Query 104482 TACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTG 104540 || || || | ||| || || | || ||||| || || |||||||| ||||| |||| Sbjct 2999323 GACGTTGTCAATGGTGTC-TGAGCTCTCAACCTCGAGCGTGATAGTCTTGCCAGTGAGTG 2999265 Query 104541 TTTTTACAAATATCTGCAT 104559 | || || || || ||||| Sbjct 2999264 TCTTCACGAAAATTTGCAT 2999246 >seq3 Length=4213559 Score = 95.1 bits (104), Expect = 3e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197 ||||| || |||||||| || ||||| ||||| || || || || ||| | ||||| ||| Sbjct 3368175 GTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTCCATCTTCTGG 3368116 Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257 ||||||| | ||||||||||| || | |||||||| || || ||||| | ||| Sbjct 3368115 CTGAAGAAGCGTGGCCTTATGCCTGGTCTCACTTTCTCCAATGAGTTGATCTCTCGTGAC 3368056 Query 269258 GAAGGTTTACACTGCGACTTCGCTTGT 269284 || ||| | ||| || ||||| ||| Sbjct 3368055 GAGGGTCTCCACACAGATTTCGCCTGT 3368029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151397057541428