Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F001750005.1_202016-09-29] 91 sequences; 31,778,960 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq1 111 1e-19 seq4 87.8 1e-12 >seq1 Length=5141995 Score = 111 bits (122), Expect = 1e-19 Identities = 199/289 (69%), Gaps = 4/289 (1%) Strand=Plus/Plus Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGC--GCCAAGGTCGAGGGTAAGGGAAACGGTA 6258 ||||| |||||||| ||| | | | || | || ||||||||||| ||||| ||||||| Sbjct 3180723 TTCTATCGCTACAAGATG--GAGAAGCTCCAGGCTAAGGTCGAGGGCAAGGGCAACGGTA 3180780 Query 6259 TTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCT 6318 |||| ||||| | |||||| || ||| || || | ||| | || ||| | ||| Sbjct 3180781 TTAAGACCGTTGTCGTCAACCTGAACTCAGTTGCCCAGTCCCTCAGTCGGCCTCCTGCCT 3180840 Query 6319 ACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACG 6378 | | | || || ||||| | |||||||| || ||| | | | | | | ||| Sbjct 3180841 ATCTCATCAAGTACTTCGGATTTGAACTTGGTGCCCAGGCCAACGCTAAGCCCTCCGACG 3180900 Query 6379 AGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCT 6438 | || | ||| | ||||| || || | | ||||||| ||||| | || ||||||| Sbjct 3180901 ACCGTTGGATCATCAACGGCTCTCACGATGCCCCCAAGCTCCAGGATTACCTCGACGGCT 3180960 Query 6439 TTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 | || ||||||||||||||| | | ||| | ||||| |||||||| Sbjct 3180961 TCATCGCCAAGTTTGTGCTGTGCAAGAAGTGCAAGAACCCCGAGACCGA 3181009 >seq4 Length=3327763 Score = 87.8 bits (96), Expect = 1e-12 Identities = 163/238 (68%), Gaps = 1/238 (0%) Strand=Plus/Minus Query 38082 CAATCATTA-CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATT 38140 |||||| | || || | || ||||||||||| || |||||| |||||| || || || Sbjct 2999482 CAATCACTGGCCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTT 2999423 Query 38141 GTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTG 38200 ||||| || | | |||| |||| || | || || ||||| || || || || || || Sbjct 2999422 ATAATCCGAAAGAGTACGTCCGTCCTCCAGCTGCTTACCGGCGAAGATAAGACGCTGCTG 2999363 Query 38201 ATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCC 38260 || | || | || || |||||| ||| || ||| || || | | || ||| Sbjct 2999362 GTCAGGAGGAATACCCTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCAATGGTGTCTGA 2999303 Query 38261 ACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || ||||| || | || ||||| || || || | || |||||||| || |||||| Sbjct 2999302 GCTCTCAACCTCGAGCGTGATAGTCTTGCCAGTGAGTGTCTTCACGAAAATTTGCATG 2999245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946828522621