Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F001750005.1_202016-09-29] 91 sequences; 31,778,960 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq4 109 5e-19 seq2 93.3 4e-14 >seq4 Length=3327763 Score = 109 bits (120), Expect = 5e-19 Identities = 128/173 (74%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| ||||| || || ||| ||||||| | ||| | | || Sbjct 2998753 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCAGCGATACCATCGACAACGTTAAGTCG 2998812 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| ||||| || || ||||| || || ||||| || Sbjct 2998813 AAGATCCAGGACAAGGAGGGCATTCCTCCCGACCAGCAGCGTCTCATCTTCGCCGGAAAG 2998872 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | |||||| ||||||| |||| |||||||| || || || || ||||| Sbjct 2998873 CAGCTTGAGGATGGCCGCACCCTCTCTGATTACAATATCCAGAAGGAGTCCAC 2998925 Score = 109 bits (120), Expect = 5e-19 Identities = 128/173 (74%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| ||||| || || ||| |||||| | ||| | | || Sbjct 2999042 ACCGGAAAGACCATCACCCTTGAGGTCGAGTCCAGCGATACTATCGACAACGTTAAGTCG 2999101 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| ||||| || || ||||| || || ||||| || Sbjct 2999102 AAGATCCAGGACAAGGAGGGCATTCCTCCCGACCAGCAGCGTCTCATCTTCGCCGGAAAG 2999161 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | |||||| ||||||| |||| |||||||| || || || || ||||| Sbjct 2999162 CAGCTTGAGGATGGCCGCACCCTCTCTGATTACAATATCCAGAAGGAGTCCAC 2999214 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || || || | || || || || |||| || || || || | | | Sbjct 2999246 ATGCAAATTTTCGTGAAGACACTCACTGGCAAGACTATCACGCTCGAGGTTGAGAGCTCA 2999305 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || ||||| ||||||||||||||||| || || || Sbjct 2999306 GACACCATTGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCAG 2999365 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| || ||||| || ||| | ||||| || || | || ||||| ||| Sbjct 2999366 CAGCGTCTTATCTTCGCCGGTAAGCAGCTGGAGGACGGACGTACTCTTTCGGATTATAAC 2999425 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || ||||| | || | || ||||| |||| || || Sbjct 2999426 ATCCAGAAGGAGTCCACTCTCCACCTGGTGTTGCGTCTGCGTGGCGG 2999472 >seq2 Length=4573486 Score = 93.3 bits (102), Expect = 4e-14 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370 |||||||||||||||||| || || ||||| || || || || |||||||| ||| | || Sbjct 2591804 AGACAAGGAGGGTATTCCCCCTGACCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGA 2591745 Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 |||| |||||| | || ||||||||||| || || || || ||| Sbjct 2591744 GGATGGCCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCGACC 2591699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727534495415