Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F001750005.1_202016-09-29] 91 sequences; 31,778,960 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq4 161 2e-34 seq3 158 2e-33 seq8 132 9e-26 >seq4 Length=3327763 Score = 161 bits (178), Expect = 2e-34 Identities = 168/218 (77%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | ||| || |||||||| || ||||| || ||||| ||| Sbjct 2999244 CCACCACGGAGGCGAAGCACGAGGTGGAGAGTGGACTCCTTCTGGATATTGTAATCAGAG 2999185 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| |||||||| ||||| | || |||||||| ||| Sbjct 2999184 AGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGA 2999125 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG-ATTCTAC 68413 ||||| |||||||| || ||||| | ||| ||| ||||| || || |||| | || || Sbjct 2999124 ATGCCCTCCTTGTCCTGGATCTTCGACTTAACGTTGTCGATAGTATC-GCTGGACTCGAC 2999066 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 || | ||||||||| ||||| || ||||||||||||| Sbjct 2999065 CTCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGACGA 2999028 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || ||||| |||| ||| || |||||||| || |||||||||||||| || Sbjct 2999472 CCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTATAATCCGAA 2999413 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | || ||||| || ||| Sbjct 2999412 AGAGTACGTCCGTCCTCCAGCTGCTTACCGGCGAAGATAAGACGCTGCTGGTCAGGAGGA 2999353 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| |||||||| ||||||| || |||||||||| || || Sbjct 2999352 ATACCCTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACC 2999293 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || || || ||||| ||||| ||||| || ||||| Sbjct 2999292 TCGAGCGTGATAGTCTTGCCAGTGAGTGTCTTCACGAAAATTTGCAT 2999246 Score = 105 bits (116), Expect = 1e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 225779 TCGTGGTCCACGTACACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCA 225838 ||||| || ||||| || ||| || || | | |||||| ||||| ||||| | Sbjct 2417710 TCGTGCTCGACGTAGACGGTCTTGACCTCATCCTTCTTGGGGAAACCCTCGAGCTGCTCG 2417651 Query 225839 TTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAA 225898 || || ||||| | ||||| |||| || | ||||||||||||| ||| |||||| Sbjct 2417650 TTGTTGATAGCACGCATGAGGGTGGTCTTTCCGGAACCGTTGGGACCGAGGAGACCGTAA 2417591 Query 225899 TGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCA 225958 | | || ||||||| | ||| | || |||||| || |||||| |||| ||||| Sbjct 2417590 CGCTGACCACGCTTGAGGCGCAGGTGAGTCTGGTTCAGCAGAATCTTGGCACCGTAGGCC 2417531 Query 225959 AGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996 |||||||| ||| | ||| ||||| |||| ||||| Sbjct 2417530 AGGGAGAAAGTGCAGTTGCAAAGGTCGACACCTTCCTC 2417493 >seq3 Length=4213559 Score = 158 bits (174), Expect = 2e-33 Identities = 302/440 (69%), Gaps = 10/440 (2%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||||||||| || || || |||||||||||||| |||||| | Sbjct 3367726 CATGACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGC 3367785 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 ||||| ||| |||||||||||| |||||||| ||| | | ||| || || Sbjct 3367786 CAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCC 3367845 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || | | ||||||||| |||||||| ||||||| || |||||| | ||||| Sbjct 3367846 GAGGGCCACCAGCAGGCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGAGTT 3367905 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||| | || |||||| | ||||| | ||| |||| ||| || |||| || Sbjct 3367906 CATGCCGAGCAGAGCGCAGGGAAGAGCGTCAGTCAGGAACTCCTGCTCGATGCCGACGGC 3367965 Query 10175 TTCCTCGACGATGCTCTTTACCACGTCAAGGGACA----GCTTGTTCTCGAGCTTCGAAT 10230 || ||| ||| || ||||| | |||| || | | |||| | | || Sbjct 3367966 CTCAACGATGATAGCCTCAACCACCT-TAGGGTCAGGGCGGTGGTTC---ATGTGGGAGA 3368021 Query 10231 ACAGGAGCTCTCCAAACTGCTG-GTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGAC 10289 |||| || | || | ||| |||||| |||||||| || ||| ||||| ||||| Sbjct 3368022 ACAGCAGACAGGCGAAAT-CTGTGTGGAGACCCTCGTCACGAGAGATCAACTCATTGGAG 3368080 Query 10290 AAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCG 10349 ||| ||||| ||||| || || || || ||||||||| |||| | ||| || || Sbjct 3368081 AAAGTGAGACCAGGCATAAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCA 3368140 Query 10350 GAGAACAGAAGACCCTCCAC 10369 ||||| | | |||||| || Sbjct 3368141 GAGAAGAAGATACCCTCGAC 3368160 Score = 93.3 bits (102), Expect = 8e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 10623 AGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAG 10682 |||||||| | || ||||| ||| | | || |||||| | |||| ||| ||||||| Sbjct 3368474 AGGTTCTCGTTGACAATGCCGTCGGAGGCGGCGAAGAAGGCCAGGACGTGGGAGATGAAG 3368533 Query 10683 TGGCGCTCATCATCGTTCAGTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACC 10742 | |||||||| |||||||| | ||||||| | ||||| | ||| | | | Sbjct 3368534 TAACGCTCATCGTCGTTCAGGCGGTTGTGCCAGTCGTGAAGATCCTTGGAGAGATCAATC 3368593 Query 10743 TCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786 ||||| | |||||||||| ||| |||||||||||||||| || Sbjct 3368594 TCCTCGGCAGTCCAGAAAGAGGCTTCGGCCTTCTTGTACATTTG 3368637 >seq8 Length=1853719 Score = 132 bits (146), Expect = 9e-26 Identities = 139/180 (77%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||| || || | ||||| || | |||||| |||||||| || Sbjct 999061 TTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATC 999002 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || |||||||| |||||||| || ||||| | ||||||| ||| Sbjct 999001 AGACGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 998942 Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| ||| || || || || | ||| ||||| || ||||| |||||||||||||| Sbjct 998941 ATGGTGTC-GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 998883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621351654520