Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F001750005.1_202016-09-29] 91 sequences; 31,778,960 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq4 109 5e-19 seq2 84.2 2e-11 >seq4 Length=3327763 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| || || | || || || || || || |||||||| | || |||||| | || Sbjct 2999230 AAGCACGAGGTGGAGAGTGGACTCCTTCTGGATATTGTAATCAGAGAGGGTGCGGCCATC 2999171 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||||||||||| ||||| | ||||| |||||||||||||||||||| || || || || Sbjct 2999170 CTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTC 2999111 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| || || | ||||| | || || || || | || | ||| Sbjct 2999110 CTGGATCTTCGACTTAACGTTGTCGATAGTATCGCTGGACTCGACCTCAAGGGTGATGGT 2999051 Query 64411 CTTGCCGGTCAAAGTTTTTACGA 64433 ||| ||||||| || || |||| Sbjct 2999050 CTTTCCGGTCAGGGTCTTGACGA 2999028 Score = 102 bits (112), Expect = 8e-17 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| || || | || || || || || || |||||||| | || |||||| | || Sbjct 2998941 AAGCACGAGGTGGAGAGTGGACTCCTTCTGGATATTGTAATCAGAGAGGGTGCGGCCATC 2998882 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||||||||||| ||||| | ||||| |||||||||||||||||||| || || || || Sbjct 2998881 CTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTC 2998822 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| || || | ||||| | || || || || | || | ||| Sbjct 2998821 CTGGATCTTCGACTTAACGTTGTCGATGGTATCGCTGGACTCGACCTCAAGGGTGATGGT 2998762 Query 64411 CTTGCCGGT 64419 |||||| || Sbjct 2998761 CTTGCCAGT 2998753 >seq2 Length=4573486 Score = 84.2 bits (92), Expect = 2e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||| || || |||| ||||| || || || ||||||||||| | Sbjct 2591669 ACCACCACGCAGGCGAAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGA 2591728 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | || || |||||||||||||| | || || ||||| ||||| || || Sbjct 2591729 AAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCAGGGGG 2591788 Query 64336 AATTCCTTCTTTTTCTTGT 64354 ||| || || || ||| || Sbjct 2591789 AATACCCTCCTTGTCTAGT 2591807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644231654040