Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F001750005.1_202016-09-29] 91 sequences; 31,778,960 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq3 150 2e-31 seq8 96.9 3e-15 >seq3 Length=4213559 Score = 150 bits (166), Expect = 2e-31 Identities = 354/527 (67%), Gaps = 33/527 (6%) Strand=Plus/Minus Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG-- 52383 || || ||| || ||| |||||| | ||||| | ||||||||| | |||| || Sbjct 3368253 GTTCCCTGCATTGCCAAGAAGGCTAACTGGGCCCTCAAGTGGATCAA---CGACCGCGAG 3368197 Query 52384 -CCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGC 52442 | || | || ||| |||| ||||||||| |||||||| | || || || ||| Sbjct 3368196 TCAACCTTCGCTTCGCGTCTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGC 3368137 Query 52443 AGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGC 52502 || ||| ||||||| | | || | | ||| | ||||| || || || ||| | Sbjct 3368136 TCATTCGCCTCCATCTTCTGGCTGAAGAAGCGTGGCCTTATGCCTGGTCTCACTTTCTCC 3368077 Query 52503 AACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT------CTAC 52556 || |||||||| || || ||||| || || ||||| || || || || || || | Sbjct 3368076 AATGAGTTGATCTCTCGTGACGAGGGTCTCCACACAGATTTCGCCTGTCTGCTGTTCTCC 3368017 Query 52557 TACAAGA-----CGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCA 52611 ||| || ||| | ||||| || | | || || | ||| | ||| Sbjct 3368016 CACATGAACCACCGCCC-TGACCCTAAGGTGG--TT--GAGGCTATCATC-----GTT-- 3367969 Query 52612 AGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGG 52671 ||||| || | ||||| ||||||| | || | ||| || || || ||||| | Sbjct 3367968 --GAGGCCGTCGGCATCGAGCAGGAGTTCCTGACTGACGCTCTTCCCTGCGCTCTGCTCG 3367911 Query 52672 GCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGC 52731 |||||||| | || |||||||||||||| ||||| || || || || ||| ||||| Sbjct 3367910 GCATGAACTCCAAGCTGATGTGCGAGTACATTGAGTTCGTCGCTGACCGCCTGCTGGTGG 3367851 Query 52732 AGCTCGGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATT 52790 ||||| || | | ||||||| ||||||| ||| || || || || ||| | ||| Sbjct 3367850 CCCTCGG-CAACAAGAAGTACTACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATC 3367792 Query 52791 TCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 || || | |||||||||||||| ||||||||||| ||||| || || Sbjct 3367791 TCCCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTA 3367745 >seq8 Length=1853719 Score = 96.9 bits (106), Expect = 3e-15 Identities = 134/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| || || |||||||| || || |||| ||| Sbjct 999063 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGA 999004 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542 | |||||||| ||||| || || || || || ||||| || | || || || | ||| Sbjct 999003 TCAGACGCTGCTGGTCAGGGGGAATGCCCTCCTTGTC-CTGGATCTTGGTCTTGACGTTG 998945 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| ||||||| || |||| || | || ||||| ||||| || || || Sbjct 998944 -TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 998886 Query 138603 AAAA 138606 ||| Sbjct 998885 GAAA 998882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261835501520