Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F001750005.1_202016-09-29] 91 sequences; 31,778,960 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq3 174 2e-38 >seq3 Length=4213559 Score = 174 bits (192), Expect = 2e-38 Identities = 368/546 (67%), Gaps = 5/546 (1%) Strand=Plus/Plus Query 116425 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 116484 |||||||||| || ||||| || || |||| |||||| || ||||||| | | Sbjct 881684 GGAAGGGCGAGAGAAGCCAGGTTGCAGACAGCAACCTCATCAGGGGCACTGTACTCGACA 881743 Query 116485 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 116544 || || || |||| || || || ||| || |||| |||||| || || ||| || Sbjct 881744 ATCTCAGTGCACAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTG 881803 Query 116545 TTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 116604 || || ||||||||||||||||| | || | || ||||| || |||| || ||||| Sbjct 881804 TTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCAAGAATG 881863 Query 116605 GCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTT 116663 || | ||| | | || | | || | | || | | | || ||||||| ||||||||| Sbjct 881864 GCGTACCAGAGCTTCTGAGCCTTG-ATGGTCTTGCGGCCACGGCCCTCCTGCTCGTACTT 881922 Query 116664 TGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGG 116723 |||||| || || || || ||||| | || | || || || |||| | || Sbjct 881923 CACGTAGAGAGCATCGAATTCATCACCGTAGACATCAGCCAGACCGGGGGCCTCGTTGGG 881982 Query 116724 ACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 116783 |||||||| | ||| | ||| ||||||| |||||||| ||||| || ||| |||| Sbjct 881983 GCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATAAAGAGATCGGGGGTCCA 882042 Query 116784 GAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 116843 | || ||||||| || ||| |||| | || || | || || || |||| || Sbjct 882043 CAAAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCCTTACCGTGGTTCTTCCGCAGGTC 882102 Query 116844 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG 116903 | || || | || ||| ||||||||||| |||||||| | || | || || ||| Sbjct 882103 GAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAATGCACCAGGGCG 882162 Query 116904 ---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAAT 116960 |||| |||||| ||||| | || || ||| || || || ||||| |||| Sbjct 882163 CTTGTTACCACCCTGGTCGACATAACGTGCGGTGTTGTTGAACACACGCAGCATAGGAAC 882222 Query 116961 GATACC 116966 ||||| Sbjct 882223 AATACC 882228 Score = 145 bits (160), Expect = 9e-30 Identities = 304/451 (67%), Gaps = 24/451 (5%) Strand=Plus/Plus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| ||||| ||||||||||||||||| ||||| ||| | ||| ||| |||||| Sbjct 3367744 GTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCAT 3367803 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGC-ACCCCAATCTGTTTGAG 127344 || || || ||||| | | ||| | |||||| | | | | | || Sbjct 3367804 GAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACC------AG 3367857 Query 127345 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 127404 || || || | |||| ||||||||||||| ||||| || |||||||| |||| || Sbjct 3367858 CAGGCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGAGTTCATGCCGAGCAG 3367917 Query 127405 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGAT 127464 || || || ||||| | |||| ||| ||| ||| | || || || | ||| Sbjct 3367918 AGCGCAGGGAAGAGCGTCAGTCAGGAACTCCTGCTCGATGCCGACGGCCTCAACGATGAT 3367977 Query 127465 GGCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTGAAG-AGTTCCACAG--- 127520 || | || ||||| ||| | ||| || || | || | ||| Sbjct 3367978 AGCCTCAA------CCACCTTAGGGTCAGGGCGGTGGTTCATGTGGGAGAACAGCAGACA 3368031 Query 127521 --CAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578 | || ||| |||||||||||||||||| ||||| | ||||| ||||| ||||| Sbjct 3368032 GGCGAAATCTGTGTGGAGACCCTCGTCACGAGAGATCAACTCATTGGAGAAAGTGAGACC 3368091 Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638 ||||| || || |||||||||| |||||| || | |||||||||||||||||||| Sbjct 3368092 AGGCATAAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCAGAGAAGAAGAT 3368151 Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGC 127669 ||||| ||| ||||| |||| |||||| Sbjct 3368152 ACCCTCGACAGCGGCGAAGGCAACCAGACGC 3368182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506502135560